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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101253316   small ribosomal subunit protein uS9 
 sly-r.6   101253316   small ribosomal subunit protein uS9 
 sly-m.5   101253316   small ribosomal subunit protein uS9 
 sly-u.5   101254200   small ribosomal subunit protein uS9 
 sly-u.5   101264114   small ribosomal subunit protein uS9 
 ath-u.5   AT2G09990   Ribosomal protein S5 domain 2-like superfamily protein 
 ath-u.5   AT3G04230   Ribosomal protein S5 domain 2-like superfamily protein 
 ath-u.5   AT5G18380   Ribosomal protein S5 domain 2-like superfamily protein 
 gma-u.5   100779794   40S ribosomal protein S16 
 gma-u.5   100812117   40S ribosomal protein S16 
 gma-u.5   100816874   40S ribosomal protein S16 
 vvi-u.5   100254540   40S ribosomal protein S16-like 
 vvi-u.5   100250286   40S ribosomal protein S16-like 
 ppo-u.5   7493685   40S ribosomal protein S16 
 ppo-u.5   7474223   40S ribosomal protein S16 
 ppo-u.5   7492045   40S ribosomal protein S16 
 mtr-u.5   11445143   40S ribosomal protein S16-1 
 mtr-u.5   11426501   40S ribosomal protein S16 
 mtr-u.5   11442071   40S ribosomal protein S16 
 osa-u.5   4351374   small ribosomal subunit protein uS9 
 osa-u.5   4349653   small ribosomal subunit protein uS9 
 zma-u.5   100194265   40S ribosomal protein S16 
 zma-u.5   100283242   40S ribosomal protein S16 

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Top 50 coexpressed genes to 101253316 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101253316 (sly-u.5 coexpression data)

CoexMap"101253316"


slyLOC101253316 | Entrez gene ID : 101253316      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 2 3 3 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (35 genes)  IEA  
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (79 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004229156.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_004229156.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_004229156.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101253316

.
sly-r.6
for
101253316

.
sly-m.5
for
101253316

.
sly-u.5
for
101254200

.
sly-u.5
for
101264114

.
ath-u.5
for
AT2G09990

.
ath-u.5
for
AT3G04230

.
ath-u.5
for
AT5G18380

.
gma-u.5
for
100779794

.
gma-u.5
for
100812117

.
gma-u.5
for
100816874

.
vvi-u.5
for
100254540

.
vvi-u.5
for
100250286

.
ppo-u.5
for
7493685

.
ppo-u.5
for
7474223

.
ppo-u.5
for
7492045

.
mtr-u.5
for
11445143

.
mtr-u.5
for
11426501

.
mtr-u.5
for
11442071

.
osa-u.5
for
4351374

.
osa-u.5
for
4349653

.
zma-u.5
for
100194265

.
zma-u.5
for
100283242

.


Ortholog ID: 1369
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G09990 AT3G04230 LOC100779794 LOC100527911 LOC101254200 LOC101253316 LOC4351374 LOC4349653 LOC100283242 LOC103850054 LOC103859025 LOC100254540 LOC100250286 LOC7474223 LOC7493685 LOC11442071 LOC11445143 LOC123120414 LOC123086417 LOC123448099 LOC123448101 LOC107894283 LOC107908898 LOC106447624 LOC106359592 CHLRE_13g573351v5 LOC8071307 LOC8068750 LOC102601557 LOC102600569 LOC102619145 LOC102615654 LOC100822284 LOC100835886 LOC107771141 LOC107779727
Function* Ribosomal protein S5 domain 2-like superfamily protein Ribosomal protein S5 domain 2-like superfamily protein 40S ribosomal protein S16 40S ribosomal protein S16 small ribosomal subunit protein uS9 small ribosomal subunit protein uS9 small ribosomal subunit protein uS9 small ribosomal subunit protein uS9 40S ribosomal protein S16 40S ribosomal protein S16-3 40S ribosomal protein S16-3 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16-1 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16-3 40S ribosomal protein S16-3-like ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 small ribosomal subunit protein uS9-like small ribosomal subunit protein uS9-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815456 819578 100779794 100527911 101254200 101253316 4351374 4349653 100283242 103850054 103859025 100254540 100250286 7474223 7493685 11442071 11445143 123120414 123086417 123448099 123448101 107894283 107908898 106447624 106359592 5719183 8071307 8068750 102601557 102600569 102619145 102615654 100822284 100835886 107771141 107779727
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