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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100812117   40S ribosomal protein S16 
 gma-r.7   100812117   40S ribosomal protein S16 
 gma-m.5   100812117   40S ribosomal protein S16 
 gma-u.5   100779794   40S ribosomal protein S16 
 gma-u.5   100816874   40S ribosomal protein S16 
 gma-u.5   100527911   40S ribosomal protein S16 
 mtr-u.5   11445143   40S ribosomal protein S16-1 
 mtr-u.5   11426501   40S ribosomal protein S16 
 mtr-u.5   11442071   40S ribosomal protein S16 
 ppo-u.5   7493685   40S ribosomal protein S16 
 ppo-u.5   7474223   40S ribosomal protein S16 
 ppo-u.5   7492045   40S ribosomal protein S16 
 ath-u.5   AT2G09990   Ribosomal protein S5 domain 2-like superfamily protein 
 ath-u.5   AT3G04230   Ribosomal protein S5 domain 2-like superfamily protein 
 ath-u.5   AT5G18380   Ribosomal protein S5 domain 2-like superfamily protein 
 bra-r.6   103859025   40S ribosomal protein S16-3 
 bra-r.6   103856304   40S ribosomal protein S16-3-like 
 bra-r.6   103845839   40S ribosomal protein S16-3 
 vvi-u.5   100254540   40S ribosomal protein S16-like 
 vvi-u.5   100250286   40S ribosomal protein S16-like 
 ghi-r.1   107908898   40S ribosomal protein S16-like 
 ghi-r.1   107934105   40S ribosomal protein S16-like 
 ghi-r.1   107935029   40S ribosomal protein S16 
 bna-r.1   125604455   40S ribosomal protein S16-3 
 bna-r.1   106417512   40S ribosomal protein S16-3-like 
 bna-r.1   106387785   40S ribosomal protein S16-3 
 cit-r.1   102619145   40S ribosomal protein S16 
 cit-r.1   102615654   40S ribosomal protein S16 
 sly-u.5   101253316   small ribosomal subunit protein uS9 
 sly-u.5   101254200   small ribosomal subunit protein uS9 
 sly-u.5   101264114   small ribosomal subunit protein uS9 
 sot-r.1   102600569   40S ribosomal protein S16-like 
 sot-r.1   102601557   40S ribosomal protein S16-like 
 sot-r.1   102588385   40S ribosomal protein S16 
 nta-r.1   107762148   small ribosomal subunit protein uS9 
 nta-r.1   107771141   small ribosomal subunit protein uS9-like 
 nta-r.1   107779727   small ribosomal subunit protein uS9-like 
 osa-u.5   4351374   small ribosomal subunit protein uS9 
 osa-u.5   4349653   small ribosomal subunit protein uS9 
 zma-u.5   100194265   40S ribosomal protein S16 
 zma-u.5   100283242   40S ribosomal protein S16 
 tae-r.2   123086417   40S ribosomal protein S16 
 tae-r.2   123091641   40S ribosomal protein S16 
 hvu-r.1   123395745   40S ribosomal protein S16 
 hvu-r.1   123448099   40S ribosomal protein S16-like 
 hvu-r.1   123448101   40S ribosomal protein S16-like 
 sbi-r.1   8068750   40S ribosomal protein S16 
 sbi-r.1   8071307   40S ribosomal protein S16 
 bdi-r.1   100835886   40S ribosomal protein S16 
 bdi-r.1   100822284   40S ribosomal protein S16 
 cre-r.1   CHLRE_13g573351v5   ribosomal protein S16 

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Top 50 coexpressed genes to 100812117 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100812117 (gma-u.5 coexpression data)

CoexMap"100812117"


gmaLOC100812117 | Entrez gene ID : 100812117    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 3 3 3 3 2 3 3 2 3 3 3 2 2 2 3 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (62 genes)  IEA  
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (138 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003518703.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3  (predict for XP_003518703.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_003518703.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100812117
gma-r.7
for
100812117
gma-m.5
for
100812117
gma-u.5
for
100779794
gma-u.5
for
100816874
gma-u.5
for
100527911
mtr-u.5
for
11445143
mtr-u.5
for
11426501
mtr-u.5
for
11442071
ppo-u.5
for
7493685
ppo-u.5
for
7474223
ppo-u.5
for
7492045
ath-u.5
for
AT2G09990
ath-u.5
for
AT3G04230
ath-u.5
for
AT5G18380
bra-r.6
for
103859025
bra-r.6
for
103856304
bra-r.6
for
103845839
vvi-u.5
for
100254540
vvi-u.5
for
100250286
ghi-r.1
for
107908898
ghi-r.1
for
107934105
ghi-r.1
for
107935029
bna-r.1
for
125604455
bna-r.1
for
106417512
bna-r.1
for
106387785
cit-r.1
for
102619145
cit-r.1
for
102615654
sly-u.5
for
101253316
sly-u.5
for
101254200
sly-u.5
for
101264114
sot-r.1
for
102600569
sot-r.1
for
102601557
sot-r.1
for
102588385
nta-r.1
for
107762148
nta-r.1
for
107771141
nta-r.1
for
107779727
osa-u.5
for
4351374
osa-u.5
for
4349653
zma-u.5
for
100194265
zma-u.5
for
100283242
tae-r.2
for
123086417
tae-r.2
for
123091641
hvu-r.1
for
123395745
hvu-r.1
for
123448099
hvu-r.1
for
123448101
sbi-r.1
for
8068750
sbi-r.1
for
8071307
bdi-r.1
for
100835886
bdi-r.1
for
100822284
cre-r.1
for
CHLRE_13g573351v5


Ortholog ID: 1369
Species gma gma gma mtr mtr mtr ppo ppo ppo ath ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol LOC100812117 LOC100779794 LOC100527911 LOC11445143 LOC11442071 LOC11412393 LOC7493685 LOC7474223 LOC7492045 AT2G09990 AT3G04230 AT5G18380 LOC103859025 LOC103856304 LOC103850054 LOC100254540 LOC100250286 LOC107908898 LOC107935029 LOC107894283 LOC106359592 LOC106433839 LOC106447624 LOC102619145 LOC102615654 LOC101253316 LOC101254200 LOC101264114 LOC102600569 LOC102601557 LOC102588385 LOC107771141 LOC107779727 LOC107780276 LOC4351374 LOC4349653 LOC100194265 LOC100283242 LOC123086417 LOC123086419 LOC123120414 LOC123395745 LOC123448099 LOC123448101 LOC8068750 LOC8071307 LOC100835886 LOC100822284 CHLRE_13g573351v5
Function* 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16-1 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 Ribosomal protein S5 domain 2-like superfamily protein Ribosomal protein S5 domain 2-like superfamily protein Ribosomal protein S5 domain 2-like superfamily protein 40S ribosomal protein S16-3 40S ribosomal protein S16-3-like 40S ribosomal protein S16-3 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16 40S ribosomal protein S16-like 40S ribosomal protein S16-3-like 40S ribosomal protein S16-3-like 40S ribosomal protein S16-3 40S ribosomal protein S16 40S ribosomal protein S16 small ribosomal subunit protein uS9 small ribosomal subunit protein uS9 small ribosomal subunit protein uS9 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16 small ribosomal subunit protein uS9-like small ribosomal subunit protein uS9-like small ribosomal subunit protein uS9-like small ribosomal subunit protein uS9 small ribosomal subunit protein uS9 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16-like 40S ribosomal protein S16-like 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 40S ribosomal protein S16 ribosomal protein S16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
hvu04120 Ubiquitin mediated proteolysis 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100812117 100779794 100527911 11445143 11442071 11412393 7493685 7474223 7492045 815456 819578 831956 103859025 103856304 103850054 100254540 100250286 107908898 107935029 107894283 106359592 106433839 106447624 102619145 102615654 101253316 101254200 101264114 102600569 102601557 102588385 107771141 107779727 107780276 4351374 4349653 100194265 100283242 123086417 123086419 123120414 123395745 123448099 123448101 8068750 8071307 100835886 100822284 5719183
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