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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101264439   putative pentatricopeptide repeat-containing protein At1g17630 
 sly-r.6   101264439   putative pentatricopeptide repeat-containing protein At1g17630 
 sot-r.1   102586083   putative pentatricopeptide repeat-containing protein At1g17630 
 nta-r.1   107767081   putative pentatricopeptide repeat-containing protein At1g17630 
 nta-r.1   107787321   putative pentatricopeptide repeat-containing protein At1g17630 
 ath-u.5   AT1G17630   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100815287   putative pentatricopeptide repeat-containing protein At1g17630 
 bra-r.6   103872545   putative pentatricopeptide repeat-containing protein At1g17630 
 vvi-u.5   104880218   putative pentatricopeptide repeat-containing protein At1g17630 
 cit-r.1   102627488   putative pentatricopeptide repeat-containing protein At1g17630 

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Top 50 coexpressed genes to 101264439 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101264439 (sly-u.5 coexpression data)

CoexMap""


slyLOC101264439 | Entrez gene ID : 101264439    
Species sly sot nta ath gma bra vvi cit tae bdi hvu mtr zma osa sbi ghi cre bna ppo
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function putative pentatricopeptide repeat-containing protein At1g17630
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004242268.1 [sequence] [blastp]
XP_069155373.1 [sequence] [blastp]
XP_069155374.1 [sequence] [blastp]
XP_069155375.1 [sequence] [blastp]
XP_069155376.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  mito 2,  chlo 2,  cyto_mito 1,  nucl_plas 1  (predict for XP_004242268.1)
nucl 3,  mito 2,  chlo 2,  cyto_mito 1,  nucl_plas 1  (predict for XP_069155373.1)
nucl 3,  mito 2,  chlo 2,  cyto_mito 1,  nucl_plas 1  (predict for XP_069155374.1)
nucl 3,  mito 2,  chlo 2,  cyto_mito 1,  nucl_plas 1  (predict for XP_069155375.1)
nucl 3,  mito 2,  chlo 2,  cyto_mito 1,  nucl_plas 1  (predict for XP_069155376.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_004242268.1)
mito 7  (predict for XP_069155373.1)
mito 7  (predict for XP_069155374.1)
mito 7  (predict for XP_069155375.1)
mito 7  (predict for XP_069155376.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101264439
sly-r.6
for
101264439
sot-r.1
for
102586083
nta-r.1
for
107767081
nta-r.1
for
107787321
ath-u.5
for
AT1G17630
gma-u.5
for
100815287
bra-r.6
for
103872545
vvi-u.5
for
104880218
cit-r.1
for
102627488

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Ortholog ID: 13214
Species sly sot nta nta ath gma bra vvi cit
Symbol LOC101264439 LOC102586083 LOC107767081 LOC107787321 AT1G17630 LOC100815287 LOC103872545 LOC104880218 LOC102627488
Function* putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 Pentatricopeptide repeat (PPR-like) superfamily protein putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101264439 102586083 107767081 107787321 838340 100815287 103872545 104880218 102627488
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