Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100815287   putative pentatricopeptide repeat-containing protein At1g17630 
 gma-r.7   100815287   putative pentatricopeptide repeat-containing protein At1g17630 
 ath-u.5   AT1G17630   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6   103872545   putative pentatricopeptide repeat-containing protein At1g17630 
 vvi-u.5   104880218   putative pentatricopeptide repeat-containing protein At1g17630 
 cit-r.1   102627488   putative pentatricopeptide repeat-containing protein At1g17630 
 sly-u.5   101264439   putative pentatricopeptide repeat-containing protein At1g17630 
 sot-r.1   102586083   putative pentatricopeptide repeat-containing protein At1g17630 
 nta-r.1   107767081   putative pentatricopeptide repeat-containing protein At1g17630 
 nta-r.1   107787321   putative pentatricopeptide repeat-containing protein At1g17630 

close


Top 50 coexpressed genes to 100815287 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100815287 (gma-u.5 coexpression data)

CoexMap"100815287"


gmaLOC100815287 | Entrez gene ID : 100815287      
Species gma ath bra vvi cit sly sot nta zma cre ppo ghi sbi tae mtr osa hvu bna bdi
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003547637.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 3,  E.R. 1,  chlo_mito 1  (predict for XP_003547637.2)
Subcellular
localization
TargetP
mito 4,  scret 3  (predict for XP_003547637.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100815287
gma-r.7
for
100815287
ath-u.5
for
AT1G17630
bra-r.6
for
103872545
vvi-u.5
for
104880218
cit-r.1
for
102627488
sly-u.5
for
101264439
sot-r.1
for
102586083
nta-r.1
for
107767081
nta-r.1
for
107787321


Ortholog ID: 13214
Species gma ath bra vvi cit sly sot nta nta
Symbol LOC100815287 AT1G17630 LOC103872545 LOC104880218 LOC102627488 LOC101264439 LOC102586083 LOC107767081 LOC107787321
Function* putative pentatricopeptide repeat-containing protein At1g17630 Pentatricopeptide repeat (PPR-like) superfamily protein putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630 putative pentatricopeptide repeat-containing protein At1g17630
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100815287 838340 103872545 104880218 102627488 101264439 102586083 107767081 107787321
The preparation time of this page was 0.1 [sec].