ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	543701	auxin-regulated protein
sly-r.6	543701	auxin-regulated protein
sly-m.5	543701	auxin-regulated protein
sly-u.5	101265018	protein SOSEKI 5-like
sly-u.5	101267866	protein SOSEKI 5
sot-r.1	102588152	protein UPSTREAM OF FLC-like
sot-r.1	102585687	protein UPSTREAM OF FLC
nta-r.1	107767543	protein SOSEKI 5-like
nta-r.1	107825522	protein SOSEKI 5
nta-r.1	107785558	protein SOSEKI 5
ath-u.5	AT3G46110	UPSTREAM OF FLC-like protein (DUF966)
ath-u.5	AT5G59790	UPSTREAM OF FLC protein (DUF966)
gma-u.5	102661484	protein SOSEKI 2
gma-u.5	100803283	protein SOSEKI 2
bra-r.6	103851548	protein UPSTREAM OF FLC
bra-r.6	103845400	protein UPSTREAM OF FLC
vvi-u.5	100256513	protein SOSEKI 5
vvi-u.5	100245073	protein SOSEKI 5
ppo-u.5	7489276	protein SOSEKI 5
ppo-u.5	7465131	protein SOSEKI 5
mtr-u.5	25485709	protein UPSTREAM OF FLC
mtr-u.5	11408748	protein UPSTREAM OF FLC
ghi-r.1	107906163	protein SOSEKI 2
ghi-r.1	121232367	protein SOSEKI 2
ghi-r.1	107963936	protein SOSEKI 2
bna-r.1	106357800	protein SOSEKI 5
bna-r.1	106366648	protein SOSEKI 5
bna-r.1	106385484	protein SOSEKI 5
cit-r.1	102622408	protein SOSEKI 5
osa-u.5	4324301	protein SOSEKI 5
osa-u.5	4327381	protein SOSEKI 5
zma-u.5	103651032	protein UPSTREAM OF FLC
zma-u.5	103636515	protein UPSTREAM OF FLC
zma-u.5	100382412	Protein UPSTREAM OF FLC
tae-r.2	123081043	protein SOSEKI 5
tae-r.2	123063736	protein SOSEKI 5
hvu-r.1	123445737	protein SOSEKI 5-like
bdi-r.1	100838768	protein UPSTREAM OF FLC
bdi-r.1	100843868	protein UPSTREAM OF FLC

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001234635.1 [sequence] [blastp]
XP_010322315.1 [sequence] [blastp]
XP_069154816.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, plas 1, golg_plas 1	(predict for NP_001234635.1)
nucl 9, plas 1, golg_plas 1	(predict for XP_010322315.1)
nucl 9, plas 1, golg_plas 1	(predict for XP_069154816.1)

Subcellular
localization
TargetP

other 7, mito 4	(predict for NP_001234635.1)
other 7, mito 3	(predict for XP_010322315.1)
other 7, mito 4	(predict for XP_069154816.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 543701	sly-r.6 for 543701	sly-m.5 for 543701	sly-u.5 for 101265018	sly-u.5 for 101267866	sot-r.1 for 102588152	sot-r.1 for 102585687	nta-r.1 for 107767543	nta-r.1 for 107825522	nta-r.1 for 107785558	ath-u.5 for AT3G46110	ath-u.5 for AT5G59790	gma-u.5 for 102661484	gma-u.5 for 100803283	bra-r.6 for 103851548	bra-r.6 for 103845400	vvi-u.5 for 100256513	vvi-u.5 for 100245073	ppo-u.5 for 7489276	ppo-u.5 for 7465131	mtr-u.5 for 25485709	mtr-u.5 for 11408748	ghi-r.1 for 107906163	ghi-r.1 for 121232367	ghi-r.1 for 107963936	bna-r.1 for 106357800	bna-r.1 for 106366648	bna-r.1 for 106385484	cit-r.1 for 102622408	osa-u.5 for 4324301	osa-u.5 for 4327381	zma-u.5 for 103651032	zma-u.5 for 103636515	zma-u.5 for 100382412	tae-r.2 for 123081043	tae-r.2 for 123063736	hvu-r.1 for 123445737	bdi-r.1 for 100838768	bdi-r.1 for 100843868

Ortholog

Ortholog ID: 2733

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

bdi

Symbol

Function^*

auxin-regulated protein

protein SOSEKI 5-like

protein SOSEKI 5

protein UPSTREAM OF FLC-like

protein UPSTREAM OF FLC

protein SOSEKI 5

UPSTREAM OF FLC-like protein (DUF966)

UPSTREAM OF FLC protein (DUF966)

protein SOSEKI 2

protein UPSTREAM OF FLC

protein SOSEKI 5

protein UPSTREAM OF FLC

protein SOSEKI 2

protein SOSEKI 5

protein UPSTREAM OF FLC

Protein UPSTREAM OF FLC

protein SOSEKI 5

protein SOSEKI 5-like

protein UPSTREAM OF FLC

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04626	Plant-pathogen interaction	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00905	Brassinosteroid biosynthesis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2
ath00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00460	Cyanoamino acid metabolism	5
cit00966	Glucosinolate biosynthesis	5
cit01210	2-Oxocarboxylic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	6
osa00360	Phenylalanine metabolism	4
osa04016	MAPK signaling pathway - plant	3
osa04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04626	Plant-pathogen interaction	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi00260	Glycine, serine and threonine metabolism	2
bdi00310	Lysine degradation	2
bdi04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

543701

101265018

101267866

102588152

102585687

107825522

107785558

107761006

823754

836100

102661484

100803283

103851548

103845400

100256513

100245073

7465131

25485709

11408748

107906163

107963936

107959085

106357800

106385484

106412364

102622408

4324301

4327381

103651032

103636515

100382412

123081043

123445737

100838768

100843868

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 543701 (sly-u.5 coexpression data)

Top 50 enrichment test to 543701 (sly-u.5 coexpression data)


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	bdi	cre	sbi
Paralog	5	2	3	2	2	2	2	2	2	3	3	1	2	3	2	1	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 543701 (sly-u.5 coexpression data)

Top 50 enrichment test to 543701 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**