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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-r.7   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-m.9   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-e.2   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-m.4.bio   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-m.4.hor   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-m.4.lig   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-m.4.str   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-m.4.tis   AT3G46110   UPSTREAM OF FLC-like protein (DUF966) 
 ath-u.5   AT5G59790   UPSTREAM OF FLC protein (DUF966) 
 bra-r.6   103851548   protein UPSTREAM OF FLC 
 bra-r.6   103845400   protein UPSTREAM OF FLC 
 bna-r.1   106357800   protein SOSEKI 5 
 bna-r.1   106366648   protein SOSEKI 5 
 bna-r.1   106385484   protein SOSEKI 5 
 ghi-r.1   107906163   protein SOSEKI 2 
 ghi-r.1   121232367   protein SOSEKI 2 
 ghi-r.1   107963936   protein SOSEKI 2 
 cit-r.1   102622408   protein SOSEKI 5 
 gma-u.5   100779732   protein SOSEKI 2 
 gma-u.5   102661484   protein SOSEKI 2 
 gma-u.5   100803283   protein SOSEKI 2 
 vvi-u.5   100256513   protein SOSEKI 5 
 vvi-u.5   100245073   protein SOSEKI 5 
 ppo-u.5   7465131   protein SOSEKI 5 
 ppo-u.5   7489276   protein SOSEKI 5 
 mtr-u.5   25485709   protein UPSTREAM OF FLC 
 mtr-u.5   11408748   protein UPSTREAM OF FLC 
 sly-u.5   543701   auxin-regulated protein 
 sly-u.5   101265018   protein SOSEKI 5-like 
 sly-u.5   101267866   protein SOSEKI 5 
 sot-r.1   102588152   protein UPSTREAM OF FLC-like 
 sot-r.1   102585687   protein UPSTREAM OF FLC 
 nta-r.1   107767543   protein SOSEKI 5-like 
 nta-r.1   107825522   protein SOSEKI 5 
 nta-r.1   107785558   protein SOSEKI 5 
 osa-u.5   4327381   protein SOSEKI 5 
 osa-u.5   4324301   protein SOSEKI 5 
 zma-u.5   103651032   protein UPSTREAM OF FLC 
 zma-u.5   103636515   protein UPSTREAM OF FLC 
 zma-u.5   100382412   Protein UPSTREAM OF FLC 
 tae-r.2   123063736   protein SOSEKI 5 
 hvu-r.1   123445737   protein SOSEKI 5-like 
 bdi-r.1   100838768   protein UPSTREAM OF FLC 
 bdi-r.1   100843868   protein UPSTREAM OF FLC 

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Top 50 coexpressed genes to AT3G46110 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G46110 (ath-u.5 coexpression data)

CoexMap"823754"


athAT3G46110 | Entrez gene ID : 823754      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 10 2 3 3 1 3 2 2 2 3 2 3 2 3 1 1 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090708 [list] [network] specification of plant organ axis polarity  (9 genes)  IMP  
GO:0010600 [list] [network] regulation of auxin biosynthetic process  (17 genes)  IMP  
GO:2000024 [list] [network] regulation of leaf development  (22 genes)  IMP  
GO:0010229 [list] [network] inflorescence development  (31 genes)  IMP  
GO:0051258 [list] [network] protein polymerization  (31 genes)  IDA  
GO:2000067 [list] [network] regulation of root morphogenesis  (33 genes)  IMP  
GO:0010928 [list] [network] regulation of auxin mediated signaling pathway  (48 genes)  IMP  
GO:1902074 [list] [network] response to salt  (50 genes)  IMP  
GO:0051302 [list] [network] regulation of cell division  (78 genes)  IMP  
GO:1905392 [list] [network] plant organ morphogenesis  (480 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325459.1 [sequence] [blastp]
NP_190197.2 [sequence] [blastp]
NP_974389.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  plas 1,  golg_plas 1  (predict for NP_001325459.1)
nucl 6,  plas 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  golg_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_190197.2)
nucl 6,  plas 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  golg_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_974389.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001325459.1)
mito 4  (predict for NP_190197.2)
mito 4  (predict for NP_974389.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G46110
ath-r.7
for
AT3G46110
ath-m.9
for
AT3G46110
ath-e.2
for
AT3G46110
ath-m.4.bio
for
AT3G46110
ath-m.4.hor
for
AT3G46110
ath-m.4.lig
for
AT3G46110
ath-m.4.str
for
AT3G46110
ath-m.4.tis
for
AT3G46110
ath-u.5
for
AT5G59790
bra-r.6
for
103851548
bra-r.6
for
103845400
bna-r.1
for
106357800
bna-r.1
for
106366648
bna-r.1
for
106385484
ghi-r.1
for
107906163
ghi-r.1
for
121232367
ghi-r.1
for
107963936
cit-r.1
for
102622408
gma-u.5
for
100779732
gma-u.5
for
102661484
gma-u.5
for
100803283
vvi-u.5
for
100256513
vvi-u.5
for
100245073
ppo-u.5
for
7465131
ppo-u.5
for
7489276
mtr-u.5
for
25485709
mtr-u.5
for
11408748
sly-u.5
for
543701
sly-u.5
for
101265018
sly-u.5
for
101267866
sot-r.1
for
102588152
sot-r.1
for
102585687
nta-r.1
for
107767543
nta-r.1
for
107825522
nta-r.1
for
107785558
osa-u.5
for
4327381
osa-u.5
for
4324301
zma-u.5
for
103651032
zma-u.5
for
103636515
zma-u.5
for
100382412
tae-r.2
for
123063736
hvu-r.1
for
123445737
bdi-r.1
for
100838768
bdi-r.1
for
100843868


Ortholog ID: 2733
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi vvi ppo mtr mtr sly sly sly sot sot nta nta nta osa osa zma zma zma tae hvu bdi bdi
Symbol AT3G46110 AT5G59790 LOC103851548 LOC103845400 LOC106357800 LOC106385484 LOC106412364 LOC107906163 LOC107963936 LOC107959085 LOC102622408 LOC102661484 LOC100803283 LOC100256513 LOC100245073 LOC7465131 LOC25485709 LOC11408748 LOC543701 LOC101265018 LOC101267866 LOC102588152 LOC102585687 LOC107825522 LOC107785558 LOC107761006 LOC4327381 LOC4324301 LOC103651032 LOC103636515 LOC100382412 LOC123081043 LOC123445737 LOC100838768 LOC100843868
Function* UPSTREAM OF FLC-like protein (DUF966) UPSTREAM OF FLC protein (DUF966) protein UPSTREAM OF FLC protein UPSTREAM OF FLC protein SOSEKI 5 protein SOSEKI 5 protein SOSEKI 5 protein SOSEKI 2 protein SOSEKI 2 protein SOSEKI 2 protein SOSEKI 5 protein SOSEKI 2 protein SOSEKI 2 protein SOSEKI 5 protein SOSEKI 5 protein SOSEKI 5 protein UPSTREAM OF FLC protein UPSTREAM OF FLC auxin-regulated protein protein SOSEKI 5-like protein SOSEKI 5 protein UPSTREAM OF FLC-like protein UPSTREAM OF FLC protein SOSEKI 5 protein SOSEKI 5 protein SOSEKI 5 protein SOSEKI 5 protein SOSEKI 5 protein UPSTREAM OF FLC protein UPSTREAM OF FLC Protein UPSTREAM OF FLC protein SOSEKI 5 protein SOSEKI 5-like protein UPSTREAM OF FLC protein UPSTREAM OF FLC
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 5
cit00966 Glucosinolate biosynthesis 5
cit01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04626 Plant-pathogen interaction 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00905 Brassinosteroid biosynthesis 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 6
osa00360 Phenylalanine metabolism 4
osa04016 MAPK signaling pathway - plant 3
osa04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04626 Plant-pathogen interaction 4
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00310 Lysine degradation 2
bdi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823754 836100 103851548 103845400 106357800 106385484 106412364 107906163 107963936 107959085 102622408 102661484 100803283 100256513 100245073 7465131 25485709 11408748 543701 101265018 101267866 102588152 102585687 107825522 107785558 107761006 4327381 4324301 103651032 103636515 100382412 123081043 123445737 100838768 100843868
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