Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123061371   splicing factor YJU2 
 tae-r.2   123189282   splicing factor YJU2 
 tae-r.2   123078477   splicing factor YJU2 
 tae-r.2   123070019   splicing factor YJU2 
 hvu-r.1   123426786   splicing factor YJU2-like 
 hvu-r.1   123443774   splicing factor YJU2-like 
 bdi-r.1   100828793   coiled-coil domain-containing protein 94 
 osa-u.5   4324443   uncharacterized LOC4324443 
 zma-u.5   100381597   uncharacterized LOC100381597 
 sbi-r.1   8081483   coiled-coil domain-containing protein 94 
 ath-u.5   AT1G17130   coiled-coil protein (DUF572) 
 gma-u.5   100817564   splicing factor YJU2 
 gma-u.5   100816349   unknown LOC100816349 
 sly-u.5   101245976   uncharacterized LOC101245976 
 bra-r.6   103872498   splicing factor YJU2 
 bra-r.6   103842809   splicing factor YJU2 
 vvi-u.5   100246531   uncharacterized LOC100246531 
 ppo-u.5   7471891   uncharacterized LOC7471891 
 ppo-u.5   7459112   uncharacterized LOC7459112 
 mtr-u.5   25487079   splicing factor YJU2 
 mtr-u.5   11434991   splicing factor YJU2 
 mtr-u.5   25484390   splicing factor YJU2 
 ghi-r.1   107927515   splicing factor YJU2 
 ghi-r.1   107903333   splicing factor YJU2 
 ghi-r.1   107903323   splicing factor YJU2 
 bna-r.1   106346718   splicing factor YJU2-like 
 bna-r.1   106434924   splicing factor YJU2 
 bna-r.1   106447225   splicing factor YJU2 
 sot-r.1   102589799   coiled-coil domain-containing protein 94 
 cit-r.1   102627758   uncharacterized LOC102627758 
 nta-r.1   107769301   uncharacterized LOC107769301 
 nta-r.1   107786178   uncharacterized LOC107786178 
 nta-r.1   107800801   uncharacterized LOC107800801 
 cre-r.1   CHLRE_17g741100v5   uncharacterized protein 

close


Top 50 coexpressed genes to 123061371 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123061371 (tae-r.2 coexpression data)

CoexMap"123061371"


taeLOC123061371 | Entrez gene ID : 123061371    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 1 1 1 1 1 2 1 2 1 2 3 3 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (447 genes)  IEA  
GO CC
GO:0071006 [list] [network] U2-type catalytic step 1 spliceosome  (19 genes)  IEA  
GO MF
Protein XP_044340384.1 [sequence] [blastp]
XP_044340385.1 [sequence] [blastp]
XP_044340386.1 [sequence] [blastp]
XP_044340387.1 [sequence] [blastp]
XP_044340388.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_044340384.1)
nucl 7,  cyto_nucl 5,  cyto 2  (predict for XP_044340385.1)
nucl 7,  cyto 2  (predict for XP_044340386.1)
nucl 7,  cyto_nucl 5,  cyto 2  (predict for XP_044340387.1)
nucl 8,  cyto 2  (predict for XP_044340388.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044340384.1)
other 8  (predict for XP_044340385.1)
other 8  (predict for XP_044340386.1)
other 8  (predict for XP_044340387.1)
other 8  (predict for XP_044340388.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123061371
tae-r.2
for
123189282
tae-r.2
for
123078477
tae-r.2
for
123070019
hvu-r.1
for
123426786
hvu-r.1
for
123443774
bdi-r.1
for
100828793
osa-u.5
for
4324443
zma-u.5
for
100381597
sbi-r.1
for
8081483
ath-u.5
for
AT1G17130
gma-u.5
for
100817564
gma-u.5
for
100816349
sly-u.5
for
101245976
bra-r.6
for
103872498
bra-r.6
for
103842809
vvi-u.5
for
100246531
ppo-u.5
for
7471891
ppo-u.5
for
7459112
mtr-u.5
for
25487079
mtr-u.5
for
11434991
mtr-u.5
for
25484390
ghi-r.1
for
107927515
ghi-r.1
for
107903333
ghi-r.1
for
107903323
bna-r.1
for
106346718
bna-r.1
for
106434924
bna-r.1
for
106447225
sot-r.1
for
102589799
cit-r.1
for
102627758
nta-r.1
for
107769301
nta-r.1
for
107786178
nta-r.1
for
107800801
cre-r.1
for
CHLRE_17g741100v5


Ortholog ID: 5409
Species tae tae tae hvu hvu bdi osa zma sbi ath gma gma sly bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC123189282 LOC123070019 LOC123053374 LOC123426786 LOC123443774 LOC100828793 LOC4324443 LOC100381597 LOC8081483 AT1G17130 LOC100817564 LOC100816349 LOC101245976 LOC103872498 LOC103842809 LOC100246531 LOC7471891 LOC7459112 LOC25487079 LOC11434991 LOC25484390 LOC107927515 LOC107903333 LOC107903323 LOC106434924 LOC106447225 LOC106415907 LOC102589799 LOC102627758 LOC107769301 LOC107786178 LOC107807710 CHLRE_17g741100v5
Function* splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2-like splicing factor YJU2-like coiled-coil domain-containing protein 94 uncharacterized LOC4324443 uncharacterized LOC100381597 coiled-coil domain-containing protein 94 coiled-coil protein (DUF572) splicing factor YJU2 unknown LOC100816349 uncharacterized LOC101245976 splicing factor YJU2 splicing factor YJU2 uncharacterized LOC100246531 uncharacterized LOC7471891 uncharacterized LOC7459112 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 splicing factor YJU2 coiled-coil domain-containing protein 94 uncharacterized LOC102627758 uncharacterized LOC107769301 uncharacterized LOC107786178 uncharacterized LOC107807710 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04814 Motor proteins 3
tae04016 MAPK signaling pathway - plant 2
tae04070 Phosphatidylinositol signaling system 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03050 Proteasome 3
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
gma04136 Autophagy - other 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03250 Viral life cycle - HIV-1 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03250 Viral life cycle - HIV-1 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre04120 Ubiquitin mediated proteolysis 2
cre03040 Spliceosome 2
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123189282 123070019 123053374 123426786 123443774 100828793 4324443 100381597 8081483 838283 100817564 100816349 101245976 103872498 103842809 100246531 7471891 7459112 25487079 11434991 25484390 107927515 107903333 107903323 106434924 106447225 106415907 102589799 102627758 107769301 107786178 107807710 5726653
The preparation time of this page was 0.2 [sec].