ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123156232	U3 small nucleolar RNA-associated protein 14
tae-r.2	123147891	uncharacterized protein C57A7.06
tae-r.2	123164685	U3 small nucleolar RNA-associated protein 14
hvu-r.1	123413484	uncharacterized protein C57A7.06
bdi-r.1	100843592	uncharacterized protein C57A7.06
osa-u.5	4332800	U3 small nucleolar RNA-associated protein 14
zma-u.5	103634670	U3 small nucleolar RNA-associated protein 14
sbi-r.1	8083648	U3 small nucleolar RNA-associated protein 14
ath-u.5	AT4G02400	U3 ribonucleoprotein (Utp) family protein
ath-u.5	AT5G08600	U3 ribonucleoprotein (Utp) family protein
gma-u.5	100811431	U3 small nucleolar RNA-associated protein 14
gma-u.5	100784007	uncharacterized protein C57A7.06
sly-u.5	101245392	uncharacterized LOC101245392
bra-r.6	103868214	U3 small nucleolar RNA-associated protein 14
bra-r.6	103836750	uncharacterized protein C57A7.06
vvi-u.5	100267476	uncharacterized LOC100267476
ppo-u.5	7491296	uncharacterized protein C57A7.06
ppo-u.5	7478845	uncharacterized protein C57A7.06
mtr-u.5	25490252	U3 small nucleolar RNA-associated protein 14 homolog A
mtr-u.5	25499036	U3 small nucleolar RNA-associated protein 14
mtr-u.5	11423401	U3 small nucleolar RNA-associated protein 14
ghi-r.1	107943240	U3 small nucleolar RNA-associated protein 14 homolog A
ghi-r.1	107931227	U3 small nucleolar RNA-associated protein 14
ghi-r.1	107946069	U3 small nucleolar RNA-associated protein 14
bna-r.1	111200819	U3 small nucleolar RNA-associated protein 14 homolog A-like
bna-r.1	125586400	U3 small nucleolar RNA-associated protein 14-like
sot-r.1	102591880	uncharacterized protein C57A7.06
cit-r.1	102624815	uncharacterized LOC102624815
nta-r.1	107830027	uncharacterized LOC107830027
nta-r.1	107789212	uncharacterized LOC107789212
nta-r.1	107774979	uncharacterized LOC107774979
cre-r.1	CHLRE_11g478950v5	uncharacterized protein
cre-r.1	CHLRE_11g478966v5	uncharacterized protein

Top 50 coexpressed genes to 123156232 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123156232 (tae-r.2 coexpression data)

CoexMap"123156232"

[Cytoscape]

Annotation

functional annotation

KEGG

taes03008 [list] [network] Ribosome biogenesis in eukaryotes (6831 genes)

GO BP

GO:0006364 [list] [network] rRNA processing

(599 genes)

IEA

GO CC

GO:0032040 [list] [network] small-subunit processome	(161 genes)	IEA
GO:0005730 [list] [network] nucleolus	(603 genes)	IEA

GO MF

Protein

XP_044430317.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 3, mito 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1

(predict for XP_044430317.1)

Subcellular
localization
TargetP

chlo 6, mito 3

(predict for XP_044430317.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123156232	tae-r.2 for 123147891	tae-r.2 for 123164685	hvu-r.1 for 123413484	bdi-r.1 for 100843592	osa-u.5 for 4332800	zma-u.5 for 103634670	sbi-r.1 for 8083648	ath-u.5 for AT4G02400	ath-u.5 for AT5G08600	gma-u.5 for 100811431	gma-u.5 for 100784007	sly-u.5 for 101245392	bra-r.6 for 103868214	bra-r.6 for 103836750	vvi-u.5 for 100267476	ppo-u.5 for 7491296	ppo-u.5 for 7478845	mtr-u.5 for 25490252	mtr-u.5 for 25499036	mtr-u.5 for 11423401	ghi-r.1 for 107943240	ghi-r.1 for 107931227	ghi-r.1 for 107946069	bna-r.1 for 111200819	bna-r.1 for 125586400	sot-r.1 for 102591880	cit-r.1 for 102624815	nta-r.1 for 107830027	nta-r.1 for 107789212	nta-r.1 for 107774979	cre-r.1 for CHLRE_11g478950v5	cre-r.1 for CHLRE_11g478966v5

Ortholog

Ortholog ID: 5347

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*