ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	111200819	U3 small nucleolar RNA-associated protein 14 homolog A-like
bna-r.1	125586400	U3 small nucleolar RNA-associated protein 14-like
bna-r.1	106381621	U3 small nucleolar RNA-associated protein 14
bra-r.6	103836750	uncharacterized protein C57A7.06
bra-r.6	103868214	U3 small nucleolar RNA-associated protein 14
ath-u.5	AT4G02400	U3 ribonucleoprotein (Utp) family protein
ath-u.5	AT5G08600	U3 ribonucleoprotein (Utp) family protein
ghi-r.1	107943240	U3 small nucleolar RNA-associated protein 14 homolog A
ghi-r.1	107931227	U3 small nucleolar RNA-associated protein 14
ghi-r.1	107946069	U3 small nucleolar RNA-associated protein 14
cit-r.1	102624815	uncharacterized LOC102624815
gma-u.5	100811431	U3 small nucleolar RNA-associated protein 14
gma-u.5	100784007	uncharacterized protein C57A7.06
vvi-u.5	100267476	uncharacterized LOC100267476
ppo-u.5	7491296	uncharacterized protein C57A7.06
ppo-u.5	7478845	uncharacterized protein C57A7.06
mtr-u.5	11423401	U3 small nucleolar RNA-associated protein 14
mtr-u.5	112416091	uncharacterized protein C57A7.06
mtr-u.5	25499036	U3 small nucleolar RNA-associated protein 14
sly-u.5	101245392	uncharacterized LOC101245392
sot-r.1	102591880	uncharacterized protein C57A7.06
nta-r.1	107830027	uncharacterized LOC107830027
nta-r.1	107789212	uncharacterized LOC107789212
nta-r.1	107774979	uncharacterized LOC107774979
osa-u.5	4332800	U3 small nucleolar RNA-associated protein 14
zma-u.5	103634670	U3 small nucleolar RNA-associated protein 14
tae-r.2	123164685	U3 small nucleolar RNA-associated protein 14
tae-r.2	123147891	uncharacterized protein C57A7.06
tae-r.2	123156232	U3 small nucleolar RNA-associated protein 14
hvu-r.1	123413484	uncharacterized protein C57A7.06
sbi-r.1	8083648	U3 small nucleolar RNA-associated protein 14
bdi-r.1	100843592	uncharacterized protein C57A7.06
cre-r.1	CHLRE_11g478950v5	uncharacterized protein
cre-r.1	CHLRE_11g478966v5	uncharacterized protein

Top 50 coexpressed genes to 111200819 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 111200819 (bna-r.1 coexpression data)

CoexMap"111200819"

[Cytoscape]

Annotation

functional annotation

KEGG

bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)

GO BP

GO:0006364 [list] [network] rRNA processing

(647 genes)

IEA

GO CC

GO:0032040 [list] [network] small-subunit processome	(155 genes)	IEA
GO:0005730 [list] [network] nucleolus	(615 genes)	IEA

GO MF

Protein

XP_048595063.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, mito 2, cysk_nucl 2, nucl_plas 2

(predict for XP_048595063.1)

Subcellular
localization
TargetP

chlo 5, mito 4

(predict for XP_048595063.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 111200819	bna-r.1 for 125586400	bna-r.1 for 106381621	bra-r.6 for 103836750	bra-r.6 for 103868214	ath-u.5 for AT4G02400	ath-u.5 for AT5G08600	ghi-r.1 for 107943240	ghi-r.1 for 107931227	ghi-r.1 for 107946069	cit-r.1 for 102624815	gma-u.5 for 100811431	gma-u.5 for 100784007	vvi-u.5 for 100267476	ppo-u.5 for 7491296	ppo-u.5 for 7478845	mtr-u.5 for 11423401	mtr-u.5 for 112416091	mtr-u.5 for 25499036	sly-u.5 for 101245392	sot-r.1 for 102591880	nta-r.1 for 107830027	nta-r.1 for 107789212	nta-r.1 for 107774979	osa-u.5 for 4332800	zma-u.5 for 103634670	tae-r.2 for 123164685	tae-r.2 for 123147891	tae-r.2 for 123156232	hvu-r.1 for 123413484	sbi-r.1 for 8083648	bdi-r.1 for 100843592	cre-r.1 for CHLRE_11g478950v5	cre-r.1 for CHLRE_11g478966v5

Ortholog

Ortholog ID: 5347

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

U3 small nucleolar RNA-associated protein 14 homolog A-like

U3 small nucleolar RNA-associated protein 14-like

U3 small nucleolar RNA-associated protein 14

uncharacterized protein C57A7.06

U3 small nucleolar RNA-associated protein 14

U3 ribonucleoprotein (Utp) family protein

U3 small nucleolar RNA-associated protein 14 homolog A

U3 small nucleolar RNA-associated protein 14

uncharacterized LOC102624815

U3 small nucleolar RNA-associated protein 14

uncharacterized protein C57A7.06

uncharacterized LOC100267476

uncharacterized protein C57A7.06

U3 small nucleolar RNA-associated protein 14

U3 small nucleolar RNA-associated protein 14 homolog A

uncharacterized LOC101245392

uncharacterized protein C57A7.06

uncharacterized LOC107830027

uncharacterized LOC107789212

uncharacterized LOC107774979

U3 small nucleolar RNA-associated protein 14

uncharacterized protein C57A7.06

U3 small nucleolar RNA-associated protein 14

uncharacterized protein C57A7.06

U3 small nucleolar RNA-associated protein 14

uncharacterized protein C57A7.06

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	9
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	8
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	5
nta03082	ATP-dependent chromatin remodeling	5
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	6
nta03013	Nucleocytoplasmic transport	5
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	5
nta03082	ATP-dependent chromatin remodeling	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3

Expression

Expression pattern

Entrez Gene ID^*

111200819

125586400

106381621

103836750

103868214

828039

830761

107943240

107931227

107946069

102624815

100811431

100784007

100267476

7491296

7478845

112416091

25499036

25490252

101245392

102591880

107830027

107789212

107774979

4332800

103634670

123164685

123147891

123156232

123413484

8083648

100843592

5722901

66055332

The preparation time of this page was 2.6 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	2	3	1	2	1	2	3	1	1	3	1	1	3	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 111200819 (bna-r.1 coexpression data)

Top 50 enrichment test to 111200819 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**