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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543013   APETALA2-like protein 1 
 tae-r.2   123047120   APETALA2-like protein 5 
 tae-r.2   123054929   APETALA2-like protein 5 
 tae-r.2   543360   APETALA2-like protein 2 
 hvu-r.1   123428148   APETALA2-like protein 5 
 hvu-r.1   123409793   APETALA2-like protein 4 
 hvu-r.1   123403691   APETALA2-like protein 1 
 bdi-r.1   100839861   floral homeotic protein APETALA 2 
 bdi-r.1   100834763   AP2-like ethylene-responsive transcription factor TOE3 
 bdi-r.1   100821738   floral homeotic protein APETALA 2 
 osa-u.5   9271266   ethylene-responsive transcription factor RAP2-7 
 osa-u.5   9269072   AP2-like ethylene-responsive transcription factor TOE3 
 zma-u.5   103629196   AP2-like ethylene-responsive transcription factor TOE3 
 zma-u.5   100381947   uncharacterized LOC100381947 
 zma-u.5   100280414   uncharacterized LOC100280414 
 sbi-r.1   8068151   ethylene-responsive transcription factor RAP2-7 
 sbi-r.1   8079577   AP2-like ethylene-responsive transcription factor TOE3 
 sbi-r.1   8078470   floral homeotic protein APETALA 2 
 ath-u.5   TOE2   target of early activation tagged (EAT) 2 
 ath-u.5   TOE3   target of early activation tagged (EAT) 3 
 ath-u.5   AP2   Integrase-type DNA-binding superfamily protein 
 gma-u.5   100796271   ethylene-responsive transcription factor RAP2-7 
 gma-u.5   100794096   floral homeotic protein APETALA 2 
 gma-u.5   100801975   floral homeotic protein APETALA 2 
 sly-u.5   AP2b   APETALA2-like protein AP2b 
 sly-u.5   AP2d   APETALA2-like protein AP2d 
 sly-u.5   AP2c   APETALA2-like protein AP2c 
 bra-r.6   103845425   AP2-like ethylene-responsive transcription factor TOE2 
 bra-r.6   103862143   floral homeotic protein APETALA 2 
 bra-r.6   103851522   AP2-like ethylene-responsive transcription factor TOE2 
 vvi-u.5   AP2   transcription factor APETALA2 
 vvi-u.5   100263240   AP2-like ethylene-responsive transcription factor TOE3 
 ppo-u.5   7465291   APETALA2-like protein 3 
 ppo-u.5   7489618   APETALA2-like protein 3 
 ppo-u.5   18100239   APETALA2-like protein 3 
 mtr-u.5   25493474   floral homeotic protein APETALA 2 
 mtr-u.5   11406478   ethylene-responsive transcription factor RAP2-7 
 mtr-u.5   11407832   floral homeotic protein APETALA 2 
 ghi-r.1   107916610   floral homeotic protein APETALA 2 
 ghi-r.1   121214048   APETALA2-like protein 3 
 ghi-r.1   107945402   floral homeotic protein APETALA 2 
 bna-r.1   106437467   ethylene-responsive transcription factor RAP2-7 
 bna-r.1   106438341   ethylene-responsive transcription factor RAP2-7-like 
 bna-r.1   106439870   AP2-like ethylene-responsive transcription factor SMZ 
 sot-r.1   102589826   AP2-like ethylene-responsive transcription factor TOE3 
 sot-r.1   102605336   ethylene-responsive transcription factor RAP2-7-like 
 sot-r.1   102582568   floral homeotic protein APETALA 2 
 cit-r.1   102606994   ethylene-responsive transcription factor RAP2-7 
 cit-r.1   102621126   floral homeotic protein APETALA 2-like 
 cit-r.1   102621401   APETALA2-like protein 2 
 nta-r.1   107819773   ethylene-responsive transcription factor RAP2-7 
 nta-r.1   107764494   floral homeotic protein APETALA 2 
 nta-r.1   107778909   AP2-like ethylene-responsive transcription factor TOE3 
 cre-r.1   CHLRE_08g383000v5   uncharacterized protein 
 cre-r.1   CHLRE_01g009575v5   uncharacterized protein 
 cre-r.1   CHLRE_08g385350v5   uncharacterized protein 

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Top 50 coexpressed genes to 543013 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543013 (tae-r.2 coexpression data)

CoexMap"543013"


taeLOC543013 | Entrez gene ID : 543013    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 2 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5253 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044385313.1 [sequence] [blastp]
XP_044385316.1 [sequence] [blastp]
XP_044385322.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044385313.1)
nucl 10  (predict for XP_044385316.1)
nucl 10  (predict for XP_044385322.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_044385313.1)
other 8,  chlo 3  (predict for XP_044385316.1)
other 8,  chlo 3  (predict for XP_044385322.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543013
tae-r.2
for
123047120
tae-r.2
for
123054929
tae-r.2
for
543360
hvu-r.1
for
123428148
hvu-r.1
for
123409793
hvu-r.1
for
123403691
bdi-r.1
for
100839861
bdi-r.1
for
100834763
bdi-r.1
for
100821738
osa-u.5
for
9271266
osa-u.5
for
9269072
zma-u.5
for
103629196
zma-u.5
for
100381947
zma-u.5
for
100280414
sbi-r.1
for
8068151
sbi-r.1
for
8079577
sbi-r.1
for
8078470
ath-u.5
for
TOE2
ath-u.5
for
TOE3
ath-u.5
for
AP2
gma-u.5
for
100796271
gma-u.5
for
100794096
gma-u.5
for
100801975
sly-u.5
for
AP2b
sly-u.5
for
AP2d
sly-u.5
for
AP2c
bra-r.6
for
103845425
bra-r.6
for
103862143
bra-r.6
for
103851522
vvi-u.5
for
AP2
vvi-u.5
for
100263240
ppo-u.5
for
7465291
ppo-u.5
for
7489618
ppo-u.5
for
18100239
mtr-u.5
for
25493474
mtr-u.5
for
11406478
mtr-u.5
for
11407832
ghi-r.1
for
107916610
ghi-r.1
for
121214048
ghi-r.1
for
107945402
bna-r.1
for
106437467
bna-r.1
for
106438341
bna-r.1
for
106439870
sot-r.1
for
102589826
sot-r.1
for
102605336
sot-r.1
for
102582568
cit-r.1
for
102606994
cit-r.1
for
102621126
cit-r.1
for
102621401
nta-r.1
for
107819773
nta-r.1
for
107764494
nta-r.1
for
107778909
cre-r.1
for
CHLRE_08g383000v5
cre-r.1
for
CHLRE_01g009575v5
cre-r.1
for
CHLRE_08g385350v5


Ortholog ID: 395
Species tae tae hvu hvu hvu bdi bdi bdi osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre cre cre
Symbol LOC543013 LOC123123462 LOC123428148 LOC123409793 LOC123453013 LOC100839861 LOC100831490 LOC100825522 LOC9269072 LOC4342787 LOC100280414 LOC100271892 LOC732805 LOC8068151 LOC8068364 LOC8057377 TOE2 SMZ SNZ LOC100797238 LOC100788303 LOC100808212 AP2c AP2e LOC101259280 LOC103845425 LOC103851522 LOC103829531 AP2 LOC100246815 LOC7465291 LOC7489618 LOC18100239 LOC11406478 LOC11407832 LOC11417561 LOC107931690 LOC107959062 LOC107913226 LOC125594129 LOC106423299 LOC106366778 LOC102605336 LOC102582568 LOC102579807 LOC102606994 LOC102622542 LOC102627474 LOC107764494 LOC107803429 LOC107810888 CHLRE_08g383000v5 CHLRE_01g009575v5 CHLRE_01g009650v5
Function* APETALA2-like protein 1 APETALA2-like protein 2 APETALA2-like protein 5 APETALA2-like protein 4 APETALA2-like protein 2 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2/ERF and B3 domain-containing transcription factor ARF14-like AP2-like ethylene-responsive transcription factor TOE3 APETALA2-like protein 3 uncharacterized LOC100280414 sister of indeterminate spikelet 1 glossy15 ethylene-responsive transcription factor RAP2-7 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 target of early activation tagged (EAT) 2 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 APETALA2-like protein AP2c APETALA2-like protein AP2e ethylene-responsive transcription factor RAP2-7-like AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE3 transcription factor APETALA2 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 APETALA2-like protein 3 APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2-like floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 ethylene-responsive transcription factor RAP2-7-like floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
zma00500 Starch and sucrose metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
sly00908 Zeatin biosynthesis 3
sly00996 Biosynthesis of various alkaloids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 9
ghi01320 Sulfur cycle 7
ghi00230 Purine metabolism 4
ghi00261 Monobactam biosynthesis 4
ghi00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot03010 Ribosome 2
sot00785 Lipoic acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
cit00620 Pyruvate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00640 Propanoate metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 5
cit04146 Peroxisome 3
cit00071 Fatty acid degradation 2
cit01040 Biosynthesis of unsaturated fatty acids 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 543013 123123462 123428148 123409793 123453013 100839861 100831490 100825522 9269072 4342787 100280414 100271892 732805 8068151 8068364 8057377 836134 824664 818510 100797238 100788303 100808212 100736534 100736535 101259280 103845425 103851522 103829531 100268051 100246815 7465291 7489618 18100239 11406478 11407832 11417561 107931690 107959062 107913226 125594129 106423299 106366778 102605336 102582568 102579807 102606994 102622542 102627474 107764494 107803429 107810888 5719829 5725844 5725812
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