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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   RAD51B   DNA repair (Rad51) family protein 
 ath-m.9   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.hor   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.lig   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.str   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.tis   RAD51B   DNA repair (Rad51) family protein 
 bra-r.6   103864899   DNA repair protein RAD51 homolog 2 
 bna-r.1   106412083   DNA repair protein RAD51 homolog 2 
 bna-r.1   106450023   DNA repair protein RAD51 homolog 2 
 vvi-u.5   100250095   DNA repair protein RAD51 homolog 2 
 mtr-u.5   11419094   DNA repair protein RAD51 homolog 2 
 sly-u.5   101253055   DNA repair protein RAD51 homolog 2 
 sot-r.1   102578308   DNA repair protein RAD51 homolog 2 
 nta-r.1   107827628   DNA repair protein RAD51 homolog 2-like 
 nta-r.1   107791433   DNA repair protein RAD51 homolog 2 
 osa-u.5   4337655   DNA repair protein RAD51 homolog 2 
 tae-r.2   123188669   DNA repair protein RAD51 homolog 2 
 hvu-r.1   123403919   DNA repair protein RAD51 homolog 2 
 sbi-r.1   8071245   DNA repair protein RAD51 homolog 2 
 bdi-r.1   100846195   DNA repair protein RAD51 homolog 2 
 cre-r.1   CHLRE_01g025300v5   uncharacterized protein 

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Top 50 coexpressed genes to RAD51B (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RAD51B (ath-m.4.bio coexpression data)

CoexMap"817404"


athRAD51B | Entrez gene ID : 817404      
Species ath bra bna vvi mtr sly sot nta osa tae hvu sbi bdi cre ghi ppo zma cit gma
Paralog 6 1 2 1 1 1 1 2 1 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03440 [list] [network] Homologous recombination (60 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (43 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO CC
GO:0033063 [list] [network] Rad51B-Rad51C-Rad51D-XRCC2 complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0000150 [list] [network] DNA strand exchange activity  (2 genes)  ISS  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (9 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (205 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
Protein NP_001031438.1 [sequence] [blastp]
NP_001118403.1 [sequence] [blastp]
NP_001154538.1 [sequence] [blastp]
NP_001323469.1 [sequence] [blastp]
NP_001323470.1 [sequence] [blastp]
NP_180423.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1,  pero 1,  cyto_pero 1  (predict for NP_001031438.1)
nucl 5,  cyto 2,  cysk 1,  chlo 1,  vacu 1,  cysk_plas 1  (predict for NP_001118403.1)
nucl 7,  cyto 2  (predict for NP_001154538.1)
chlo 6,  nucl 2,  cyto 1,  mito 1,  pero 1,  cyto_pero 1  (predict for NP_001323469.1)
chlo 6,  nucl 2,  cyto 1,  mito 1,  pero 1,  cyto_pero 1  (predict for NP_001323470.1)
chlo 6,  cyto 2,  nucl 1,  mito 1,  pero 1  (predict for NP_180423.3)
Subcellular
localization
TargetP
other 5  (predict for NP_001031438.1)
other 7  (predict for NP_001118403.1)
other 7  (predict for NP_001154538.1)
other 5  (predict for NP_001323469.1)
other 5  (predict for NP_001323470.1)
other 5  (predict for NP_180423.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
RAD51B
ath-m.9
for
RAD51B
ath-m.4.hor
for
RAD51B
ath-m.4.lig
for
RAD51B
ath-m.4.str
for
RAD51B
ath-m.4.tis
for
RAD51B
bra-r.6
for
103864899
bna-r.1
for
106412083
bna-r.1
for
106450023
vvi-u.5
for
100250095
mtr-u.5
for
11419094
sly-u.5
for
101253055
sot-r.1
for
102578308
nta-r.1
for
107827628
nta-r.1
for
107791433
osa-u.5
for
4337655
tae-r.2
for
123188669
hvu-r.1
for
123403919
sbi-r.1
for
8071245
bdi-r.1
for
100846195
cre-r.1
for
CHLRE_01g025300v5


Ortholog ID: 10681
Species bra bna bna vvi mtr sly sot nta nta osa hvu sbi bdi cre
Symbol LOC103864899 LOC106412083 LOC106450023 LOC100250095 LOC11419094 LOC101253055 LOC102578308 LOC107827628 LOC107791433 LOC4337655 LOC123403919 LOC8071245 LOC100846195 CHLRE_01g025300v5
Function* DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2-like DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103864899 106412083 106450023 100250095 11419094 101253055 102578308 107827628 107791433 4337655 123403919 8071245 100846195 5715279
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