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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-u.5   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-r.7   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-m.9   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-e.2   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-m.4.hor   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-m.4.lig   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-m.4.str   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-m.4.tis   AT3G13480   nuclear polyadenylated RNA-binding protein 
 ath-u.5   AT1G55475   uncharacterized protein 
 bra-r.6   103849772   uncharacterized LOC103849772 
 bra-r.6   103870128   uncharacterized LOC103870128 
 bra-r.6   103832585   uncharacterized LOC103832585 
 bna-r.1   125583921   uncharacterized LOC125583921 
 bna-r.1   106452280   uncharacterized LOC106452280 
 cit-r.1   102623684   hypothetical protein 
 vvi-u.5   100260500   uncharacterized LOC100260500 
 ppo-u.5   7483232   uncharacterized LOC7483232 
 ppo-u.5   7461349   uncharacterized LOC7461349 
 sly-u.5   101252018   uncharacterized LOC101252018 
 sot-r.1   102590330   uncharacterized LOC102590330 
 nta-r.1   107813900   uncharacterized LOC107813900 
 nta-r.1   107829708   uncharacterized LOC107829708 
 osa-u.5   107278554   uncharacterized LOC107278554 
 osa-u.5   4334411   nucleolin 2-like 
 zma-u.5   100278530   uncharacterized LOC100278530 
 zma-u.5   100193460   uncharacterized LOC100193460 
 zma-u.5   100274966   uncharacterized LOC100274966 
 tae-r.2   123105384   uncharacterized LOC123105384 
 tae-r.2   123113655   uncharacterized LOC123113655 
 tae-r.2   123123174   uncharacterized LOC123123174 
 hvu-r.1   123452680   uncharacterized LOC123452680 
 bdi-r.1   100843590   uncharacterized LOC100843590 

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Top 50 coexpressed genes to AT3G13480 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G13480 (ath-m.4.bio coexpression data)

CoexMap"820550"


athAT3G13480 | Entrez gene ID : 820550      
Species ath bra bna cit vvi ppo sly sot nta osa zma tae hvu bdi sbi gma mtr ghi cre
Paralog 10 3 2 1 1 2 1 1 2 2 3 3 1 1 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001327070.1 [sequence] [blastp]
NP_187957.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  plas 4,  chlo 1,  extr 1  (predict for NP_001327070.1)
cyto 5,  plas 4,  chlo 1,  extr 1  (predict for NP_187957.3)
Subcellular
localization
TargetP
scret 7  (predict for NP_001327070.1)
scret 7  (predict for NP_187957.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G13480
ath-u.5
for
AT3G13480
ath-r.7
for
AT3G13480
ath-m.9
for
AT3G13480
ath-e.2
for
AT3G13480
ath-m.4.hor
for
AT3G13480
ath-m.4.lig
for
AT3G13480
ath-m.4.str
for
AT3G13480
ath-m.4.tis
for
AT3G13480
ath-u.5
for
AT1G55475
bra-r.6
for
103849772
bra-r.6
for
103870128
bra-r.6
for
103832585
bna-r.1
for
125583921
bna-r.1
for
106452280
cit-r.1
for
102623684
vvi-u.5
for
100260500
ppo-u.5
for
7483232
ppo-u.5
for
7461349
sly-u.5
for
101252018
sot-r.1
for
102590330
nta-r.1
for
107813900
nta-r.1
for
107829708
osa-u.5
for
107278554
osa-u.5
for
4334411
zma-u.5
for
100278530
zma-u.5
for
100193460
zma-u.5
for
100274966
tae-r.2
for
123105384
tae-r.2
for
123113655
tae-r.2
for
123123174
hvu-r.1
for
123452680
bdi-r.1
for
100843590


Ortholog ID: 6264
Species ath ath bra bra bra bna bna bna cit vvi ppo ppo sly sot nta nta osa osa zma zma zma tae tae tae hvu bdi
Symbol AT3G13480 AT1G55475 LOC103849772 LOC103870128 LOC103832585 LOC125583921 LOC106444545 LOC106360357 LOC102623684 LOC100260500 LOC7483232 LOC7461349 LOC101252018 LOC102590330 LOC107813900 LOC107829708 LOC107278554 LOC4334411 LOC100278530 LOC100193460 LOC100274966 LOC123105384 LOC123113655 LOC123123174 LOC123452680 LOC100843590
Function* nuclear polyadenylated RNA-binding protein uncharacterized protein uncharacterized LOC103849772 uncharacterized LOC103870128 uncharacterized LOC103832585 uncharacterized LOC125583921 proline-, glutamic acid- and leucine-rich protein 1 uncharacterized LOC106360357 hypothetical protein uncharacterized LOC100260500 uncharacterized LOC7483232 uncharacterized LOC7461349 uncharacterized LOC101252018 uncharacterized LOC102590330 uncharacterized LOC107813900 uncharacterized LOC107829708 uncharacterized LOC107278554 nucleolin 2-like uncharacterized LOC100278530 uncharacterized LOC100193460 uncharacterized LOC100274966 uncharacterized LOC123105384 uncharacterized LOC123113655 uncharacterized LOC123123174 uncharacterized LOC123452680 uncharacterized LOC100843590
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
bra01310 Nitrogen cycle 4
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
cit00513 Various types of N-glycan biosynthesis 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820550 2745831 103849772 103870128 103832585 125583921 106444545 106360357 102623684 100260500 7483232 7461349 101252018 102590330 107813900 107829708 107278554 4334411 100278530 100193460 100274966 123105384 123113655 123123174 123452680 100843590
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