ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100274966	uncharacterized LOC100274966
zma-r.6	100274966	uncharacterized LOC100274966
zma-u.5	100278530	uncharacterized LOC100278530
zma-u.5	100193460	uncharacterized LOC100193460
osa-u.5	107278554	uncharacterized LOC107278554
osa-u.5	4334411	nucleolin 2-like
tae-r.2	123105384	uncharacterized LOC123105384
tae-r.2	123113655	uncharacterized LOC123113655
tae-r.2	123123174	uncharacterized LOC123123174
hvu-r.1	123452680	uncharacterized LOC123452680
bdi-r.1	100843590	uncharacterized LOC100843590
ath-u.5	AT3G13480	nuclear polyadenylated RNA-binding protein
ath-u.5	AT1G55475	uncharacterized protein
sly-u.5	101252018	uncharacterized LOC101252018
bra-r.6	103849772	uncharacterized LOC103849772
bra-r.6	103870128	uncharacterized LOC103870128
bra-r.6	103832585	uncharacterized LOC103832585
vvi-u.5	100260500	uncharacterized LOC100260500
ppo-u.5	7483232	uncharacterized LOC7483232
ppo-u.5	7461349	uncharacterized LOC7461349
bna-r.1	125583921	uncharacterized LOC125583921
bna-r.1	106452280	uncharacterized LOC106452280
sot-r.1	102590330	uncharacterized LOC102590330
cit-r.1	102623684	hypothetical protein
nta-r.1	107813900	uncharacterized LOC107813900
nta-r.1	107829708	uncharacterized LOC107829708

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001142671.1 [sequence] [blastp]
XP_008669121.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 2	(predict for NP_001142671.1)
chlo 6, mito 3	(predict for XP_008669121.1)

Subcellular
localization
TargetP

chlo 4, mito 3	(predict for NP_001142671.1)
chlo 4, mito 3	(predict for XP_008669121.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100274966	zma-r.6 for 100274966	zma-u.5 for 100278530	zma-u.5 for 100193460	osa-u.5 for 107278554	osa-u.5 for 4334411	tae-r.2 for 123105384	tae-r.2 for 123113655	tae-r.2 for 123123174	hvu-r.1 for 123452680	bdi-r.1 for 100843590	ath-u.5 for AT3G13480	ath-u.5 for AT1G55475	sly-u.5 for 101252018	bra-r.6 for 103849772	bra-r.6 for 103870128	bra-r.6 for 103832585	vvi-u.5 for 100260500	ppo-u.5 for 7483232	ppo-u.5 for 7461349	bna-r.1 for 125583921	bna-r.1 for 106452280	sot-r.1 for 102590330	cit-r.1 for 102623684	nta-r.1 for 107813900	nta-r.1 for 107829708

Ortholog

Ortholog ID: 6264

Species

zma

osa

tae

hvu

bdi

ath

sly

bra

vvi

ppo

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100274966

uncharacterized LOC100278530

uncharacterized LOC100193460

uncharacterized LOC107278554

nucleolin 2-like

uncharacterized LOC123105384

uncharacterized LOC123113655

uncharacterized LOC123123174

uncharacterized LOC123452680

uncharacterized LOC100843590

nuclear polyadenylated RNA-binding protein

uncharacterized protein

uncharacterized LOC101252018

uncharacterized LOC103849772

uncharacterized LOC103870128

uncharacterized LOC103832585

uncharacterized LOC100260500

uncharacterized LOC7483232

uncharacterized LOC7461349

uncharacterized LOC125583921

proline-, glutamic acid- and leucine-rich protein 1

uncharacterized LOC106360357

uncharacterized LOC102590330

hypothetical protein

uncharacterized LOC107813900

uncharacterized LOC107829708

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00910	Nitrogen metabolism	4
bra01310	Nitrogen cycle	4
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3
cit00513	Various types of N-glycan biosynthesis	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100274966

100278530

100193460

107278554

4334411

123105384

123113655

123123174

123452680

100843590

820550

2745831

101252018

103849772

103870128

103832585

100260500

7483232

7461349

125583921

106444545

106360357

102590330

102623684

107813900

107829708

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100274966 (zma-u.5 coexpression data)

Top 50 enrichment test to 100274966 (zma-u.5 coexpression data)


Species	zma	osa	tae	hvu	bdi	ath	sly	bra	vvi	ppo	bna	sot	cit	nta	sbi	gma	mtr	ghi	cre
Paralog	4	2	3	1	1	2	1	3	1	2	2	1	1	2	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100274966 (zma-u.5 coexpression data)

Top 50 enrichment test to 100274966 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**