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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   UBC19   ubiquitin-conjugating enzyme19 
 ath-u.5   UBC19   ubiquitin-conjugating enzyme19 
 ath-r.7   UBC19   ubiquitin-conjugating enzyme19 
 ath-m.9   UBC19   ubiquitin-conjugating enzyme19 
 ath-e.2   UBC19   ubiquitin-conjugating enzyme19 
 ath-m.4.hor   UBC19   ubiquitin-conjugating enzyme19 
 ath-m.4.lig   UBC19   ubiquitin-conjugating enzyme19 
 ath-m.4.str   UBC19   ubiquitin-conjugating enzyme19 
 ath-m.4.tis   UBC19   ubiquitin-conjugating enzyme19 
 ath-u.5   UBC20   ubiquitin-conjugating enzyme 20 
 bra-r.6   103868621   ubiquitin-conjugating enzyme E2 20 
 bra-r.6   103836709   ubiquitin-conjugating enzyme E2 19 
 bna-r.1   106346209   ubiquitin-conjugating enzyme E2 19 
 bna-r.1   125588691   ubiquitin-conjugating enzyme E2 20 
 bna-r.1   125586993   ubiquitin-conjugating enzyme E2 20-like 
 ghi-r.1   121232233   ubiquitin-conjugating enzyme E2 20 
 ghi-r.1   107954302   ubiquitin-conjugating enzyme E2 20 
 cit-r.1   102627331   ubiquitin-conjugating enzyme E2 20 
 gma-u.5   100527864   ubiquitin-conjugating enzyme 
 gma-u.5   100305664   ubiquitin-conjugating enzyme E2 
 vvi-u.5   100249922   ubiquitin-conjugating enzyme E2 20 
 ppo-u.5   7467390   ubiquitin-conjugating enzyme E2 20 
 ppo-u.5   7467982   ubiquitin-conjugating enzyme E2 20 
 mtr-u.5   11436215   ubiquitin-conjugating enzyme E2 20 
 mtr-u.5   11438138   ubiquitin-conjugating enzyme E2 20 
 sly-u.5   101266186   ubiquitin-conjugating enzyme E2 20 
 sot-r.1   102580029   ubiquitin-conjugating enzyme E2 20-like 
 nta-r.1   107777365   ubiquitin-conjugating enzyme E2 19-like 
 nta-r.1   107782018   ubiquitin-conjugating enzyme E2 20-like 
 osa-u.5   4325174   uncharacterized LOC4325174 
 zma-u.5   100283079   ubiquitin-conjugating enzyme X 
 zma-u.5   100192735   putative ubiquitin-conjugating enzyme family 
 tae-r.2   123069670   ubiquitin-conjugating enzyme E2 20 
 tae-r.2   123061082   ubiquitin-conjugating enzyme E2 20 
 tae-r.2   123078155   ubiquitin-conjugating enzyme E2 20 
 hvu-r.1   123443502   ubiquitin-conjugating enzyme E2 20-like 
 sbi-r.1   8060563   ubiquitin-conjugating enzyme E2 20 
 sbi-r.1   8054646   ubiquitin-conjugating enzyme E2 19 
 bdi-r.1   100835833   ubiquitin-conjugating enzyme E2 20 

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Top 50 coexpressed genes to UBC19 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UBC19 (ath-m.4.bio coexpression data)

CoexMap"821545"


athUBC19 | Entrez gene ID : 821545      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 2 1 2 1 2 2 1 1 2 1 2 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO:0006605 [list] [network] protein targeting  (92 genes)  IMP  
GO:0051301 [list] [network] cell division  (192 genes)  IEP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IDA  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078192.1 [sequence] [blastp]
NP_566653.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  extr 3,  chlo 2,  cyto 1  (predict for NP_001078192.1)
chlo 4,  nucl 2,  extr 2,  chlo_mito 2  (predict for NP_566653.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078192.1)
chlo 6,  other 3  (predict for NP_566653.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
UBC19
ath-u.5
for
UBC19
ath-r.7
for
UBC19
ath-m.9
for
UBC19
ath-e.2
for
UBC19
ath-m.4.hor
for
UBC19
ath-m.4.lig
for
UBC19
ath-m.4.str
for
UBC19
ath-m.4.tis
for
UBC19
ath-u.5
for
UBC20
bra-r.6
for
103868621
bra-r.6
for
103836709
bna-r.1
for
106346209
bna-r.1
for
125588691
bna-r.1
for
125586993
ghi-r.1
for
121232233
ghi-r.1
for
107954302
cit-r.1
for
102627331
gma-u.5
for
100527864
gma-u.5
for
100305664
vvi-u.5
for
100249922
ppo-u.5
for
7467390
ppo-u.5
for
7467982
mtr-u.5
for
11436215
mtr-u.5
for
11438138
sly-u.5
for
101266186
sot-r.1
for
102580029
nta-r.1
for
107777365
nta-r.1
for
107782018
osa-u.5
for
4325174
zma-u.5
for
100283079
zma-u.5
for
100192735
tae-r.2
for
123069670
tae-r.2
for
123061082
tae-r.2
for
123078155
hvu-r.1
for
123443502
sbi-r.1
for
8060563
sbi-r.1
for
8054646
bdi-r.1
for
100835833


Ortholog ID: 4557
Species ath ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi
Symbol UBC19 UBC20 LOC103836709 LOC103871344 LOC125586993 LOC106443892 LOC106368827 LOC121232233 LOC107954302 LOC102627331 LOC100527864 LOC100305664 LOC100249922 LOC7467390 LOC7467982 LOC11436215 LOC11438138 LOC101266186 LOC102580029 LOC107777365 LOC107782018 LOC4325174 LOC100283079 LOC100192735 LOC123069670 LOC123061082 LOC123078155 LOC123443502 LOC8060563 LOC8054646 LOC100835833
Function* ubiquitin-conjugating enzyme19 ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme E2 19 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20-like ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme ubiquitin-conjugating enzyme E2 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20-like ubiquitin-conjugating enzyme E2 19-like ubiquitin-conjugating enzyme E2 20-like uncharacterized LOC4325174 ubiquitin-conjugating enzyme X putative ubiquitin-conjugating enzyme family ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 20-like ubiquitin-conjugating enzyme E2 20 ubiquitin-conjugating enzyme E2 19 ubiquitin-conjugating enzyme E2 20
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 5
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 5
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
bdi04814 Motor proteins 2
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821545 841471 103836709 103871344 125586993 106443892 106368827 121232233 107954302 102627331 100527864 100305664 100249922 7467390 7467982 11436215 11438138 101266186 102580029 107777365 107782018 4325174 100283079 100192735 123069670 123061082 123078155 123443502 8060563 8054646 100835833
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