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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-r.7   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.9   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-e.2   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.hor   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.lig   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.str   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.tis   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 bra-r.6   103873177   RING-H2 finger protein ATL48 
 bna-r.1   125591519   RING-H2 finger protein ATL48-like 
 ghi-r.1   107939811   RING-H2 finger protein ATL48 
 ghi-r.1   107939274   RING-H2 finger protein ATL48 
 cit-r.1   102609757   RING-H2 finger protein ATL48 
 gma-u.5   100500416   RING-H2 finger protein ATL48 
 vvi-u.5   100263814   RING-H2 finger protein ATL48-like 
 ppo-u.5   18105832   RING-H2 finger protein ATL48 
 ppo-u.5   18103774   RING-H2 finger protein ATL48 
 mtr-u.5   112416521   RING-H2 finger protein ATL48 
 sot-r.1   102579363   RING-H2 finger protein ATL48-like 
 nta-r.1   107798707   RING-H2 finger protein ATL48-like 
 osa-u.5   4346912   RING-H2 finger protein ATL48 
 zma-u.5   100281013   RING-H2 finger protein ATL3I 
 tae-r.2   123121407   RING-H2 finger protein ATL48 
 tae-r.2   123111842   RING-H2 finger protein ATL48 
 tae-r.2   123103632   RING-H2 finger protein ATL48 
 hvu-r.1   123395591   RING-H2 finger protein ATL48-like 
 sbi-r.1   8056188   RING-H2 finger protein ATL48 
 bdi-r.1   100845238   RING-H2 finger protein ATL48 

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Top 50 coexpressed genes to AT3G48030 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G48030 (ath-m.4.bio coexpression data)

CoexMap"823958"


athAT3G48030 | Entrez gene ID : 823958      
Species ath bra bna ghi cit gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 9 1 1 2 1 1 1 2 1 1 1 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326258.1 [sequence] [blastp]
NP_190386.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  mito 1,  cysk_nucl 1,  cyto 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001326258.1)
cyto 5,  nucl 4  (predict for NP_190386.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326258.1)
other 7  (predict for NP_190386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G48030
ath-u.5
for
AT3G48030
ath-r.7
for
AT3G48030
ath-m.9
for
AT3G48030
ath-e.2
for
AT3G48030
ath-m.4.hor
for
AT3G48030
ath-m.4.lig
for
AT3G48030
ath-m.4.str
for
AT3G48030
ath-m.4.tis
for
AT3G48030
bra-r.6
for
103873177
bna-r.1
for
125591519
ghi-r.1
for
107939811
ghi-r.1
for
107939274
cit-r.1
for
102609757
gma-u.5
for
100500416
vvi-u.5
for
100263814
ppo-u.5
for
18105832
ppo-u.5
for
18103774
mtr-u.5
for
112416521
sot-r.1
for
102579363
nta-r.1
for
107798707
osa-u.5
for
4346912
zma-u.5
for
100281013
tae-r.2
for
123121407
tae-r.2
for
123111842
tae-r.2
for
123103632
hvu-r.1
for
123395591
sbi-r.1
for
8056188
bdi-r.1
for
100845238


Ortholog ID: 11971
Species ath bra bna ghi ghi cit gma vvi ppo ppo mtr sot nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G48030 LOC103873177 LOC125591519 LOC107939811 LOC107939274 LOC102609757 LOC100500416 LOC100263814 LOC18105832 LOC18103774 LOC112416521 LOC102579363 LOC107798707 LOC4346912 LOC100281013 LOC123121407 LOC123111842 LOC123103632 LOC123395591 LOC8056188 LOC100845238
Function* hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL3I RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra03060 Protein export 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta00100 Steroid biosynthesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00190 Oxidative phosphorylation 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823958 103873177 125591519 107939811 107939274 102609757 100500416 100263814 18105832 18103774 112416521 102579363 107798707 4346912 100281013 123121407 123111842 123103632 123395591 8056188 100845238
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