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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-r.7   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.9   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-e.2   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.bio   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.hor   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.lig   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.str   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.tis   AT3G48030   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein 
 gma-u.5   100500416   RING-H2 finger protein ATL48 
 vvi-u.5   100263814   RING-H2 finger protein ATL48-like 
 ppo-u.5   18105832   RING-H2 finger protein ATL48 
 ppo-u.5   18103774   RING-H2 finger protein ATL48 
 mtr-u.5   112416521   RING-H2 finger protein ATL48 
 osa-u.5   4346912   RING-H2 finger protein ATL48 
 zma-u.5   100281013   RING-H2 finger protein ATL3I 

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Top 50 coexpressed genes to AT3G48030 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G48030 (ath-u.5 coexpression data)

CoexMap"823958"


athAT3G48030 | Entrez gene ID : 823958      
Species ath gma vvi ppo mtr osa zma tae hvu ghi bdi cit bra cre sbi bna sly nta sot
Paralog 9 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326258.1 [sequence] [blastp]
NP_190386.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  mito 1,  cysk_nucl 1,  cyto 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001326258.1)
cyto 5,  nucl 4  (predict for NP_190386.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326258.1)
other 7  (predict for NP_190386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G48030

.
ath-r.7
for
AT3G48030

.
ath-m.9
for
AT3G48030

.
ath-e.2
for
AT3G48030

.
ath-m.4.bio
for
AT3G48030

.
ath-m.4.hor
for
AT3G48030

.
ath-m.4.lig
for
AT3G48030

.
ath-m.4.str
for
AT3G48030

.
ath-m.4.tis
for
AT3G48030

.
gma-u.5
for
100500416

.
vvi-u.5
for
100263814

.
ppo-u.5
for
18105832

.
ppo-u.5
for
18103774

.
mtr-u.5
for
112416521

.
osa-u.5
for
4346912

.
zma-u.5
for
100281013

.


Ortholog ID: 11971
Species ath gma osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta
Symbol AT3G48030 LOC100500416 LOC4346912 LOC100281013 LOC103873177 LOC100263814 LOC18103774 LOC18105832 LOC112416521 LOC123103632 LOC123111842 LOC123395591 LOC107939274 LOC107939811 LOC125591519 LOC8056188 LOC102579363 LOC102609757 LOC100845238 LOC107798707
Function* hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL3I RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like RING-H2 finger protein ATL48 RING-H2 finger protein ATL48 RING-H2 finger protein ATL48-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00190 Oxidative phosphorylation 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra03060 Protein export 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta00100 Steroid biosynthesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823958 100500416 4346912 100281013 103873177 100263814 18103774 18105832 112416521 123103632 123111842 123395591 107939274 107939811 125591519 8056188 102579363 102609757 100845238 107798707
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