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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G49950   GRAS family transcription factor 
 ath-m.9   AT3G49950   GRAS family transcription factor 
 ath-m.4.hor   AT3G49950   GRAS family transcription factor 
 ath-m.4.lig   AT3G49950   GRAS family transcription factor 
 ath-m.4.str   AT3G49950   GRAS family transcription factor 
 ath-m.4.tis   AT3G49950   GRAS family transcription factor 
 bra-r.6   103840915   scarecrow-like protein 32 
 ghi-r.1   107923334   scarecrow-like protein 32 
 ghi-r.1   107941897   scarecrow-like protein 32 
 ghi-r.1   107901182   scarecrow-like protein 32 
 gma-u.5   100814364   scarecrow-like protein 32 
 gma-u.5   100808898   scarecrow-like protein 32 
 vvi-u.5   100252691   scarecrow-like protein 32 
 ppo-u.5   18101128   scarecrow-like protein 32 
 mtr-u.5   11411849   scarecrow-like protein 32 
 sly-u.5   GRAS26   GRAS transcription factor GRAS26 
 sot-r.1   102605907   scarecrow-like protein 32 
 nta-r.1   107824099   scarecrow-like protein 32 
 nta-r.1   107759552   scarecrow-like protein 32 
 osa-u.5   4343769   scarecrow-like protein 32 
 zma-u.5   103647799   scarecrow-like protein 32 
 zma-u.5   100281784   GRAS family transcription factor containing protein 
 hvu-r.1   123429766   scarecrow-like protein 32 
 sbi-r.1   8078983   scarecrow-like protein 32 
 bdi-r.1   100828968   scarecrow-like protein 32 

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Top 50 coexpressed genes to AT3G49950 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G49950 (ath-m.4.bio coexpression data)

CoexMap"824157"


athAT3G49950 | Entrez gene ID : 824157      
Species ath bra ghi gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi tae cre bna cit
Paralog 6 1 3 2 1 1 1 1 1 2 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_190564.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 3  (predict for NP_190564.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_190564.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G49950
ath-m.9
for
AT3G49950
ath-m.4.hor
for
AT3G49950
ath-m.4.lig
for
AT3G49950
ath-m.4.str
for
AT3G49950
ath-m.4.tis
for
AT3G49950
bra-r.6
for
103840915
ghi-r.1
for
107923334
ghi-r.1
for
107941897
ghi-r.1
for
107901182
gma-u.5
for
100814364
gma-u.5
for
100808898
vvi-u.5
for
100252691
ppo-u.5
for
18101128
mtr-u.5
for
11411849
sly-u.5
for
GRAS26
sot-r.1
for
102605907
nta-r.1
for
107824099
nta-r.1
for
107759552
osa-u.5
for
4343769
zma-u.5
for
103647799
zma-u.5
for
100281784
hvu-r.1
for
123429766
sbi-r.1
for
8078983
bdi-r.1
for
100828968


Ortholog ID: 7245
Species bra ghi ghi ghi gma gma vvi ppo mtr sly sot nta nta osa zma zma hvu sbi bdi
Symbol LOC103840915 LOC107923334 LOC107941897 LOC107913272 LOC100814364 LOC100808898 LOC100252691 LOC18101128 LOC11411849 GRAS26 LOC102605907 LOC107824099 LOC107759552 LOC4343769 LOC103647799 LOC100281784 LOC123429766 LOC8078983 LOC100828968
Function* scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 GRAS transcription factor GRAS26 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 GRAS family transcription factor containing protein scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma00941 Flavonoid biosynthesis 2
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00052 Galactose metabolism 3
sbi00500 Starch and sucrose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103840915 107923334 107941897 107913272 100814364 100808898 100252691 18101128 11411849 101257522 102605907 107824099 107759552 4343769 103647799 100281784 123429766 8078983 100828968
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