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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G49950   GRAS family transcription factor 
 ath-m.4.bio   AT3G49950   GRAS family transcription factor 
 ath-m.4.hor   AT3G49950   GRAS family transcription factor 
 ath-m.4.lig   AT3G49950   GRAS family transcription factor 
 ath-m.4.str   AT3G49950   GRAS family transcription factor 
 ath-m.4.tis   AT3G49950   GRAS family transcription factor 
 gma-u.5   100814364   scarecrow-like protein 32 
 gma-u.5   100808898   scarecrow-like protein 32 
 vvi-u.5   100252691   scarecrow-like protein 32 
 ppo-u.5   18101128   scarecrow-like protein 32 
 mtr-u.5   11411849   scarecrow-like protein 32 
 sly-u.5   GRAS26   GRAS transcription factor GRAS26 
 osa-u.5   4343769   scarecrow-like protein 32 
 zma-u.5   103647799   scarecrow-like protein 32 
 zma-u.5   100281784   GRAS family transcription factor containing protein 

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Top 50 coexpressed genes to AT3G49950 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G49950 (ath-m.9 coexpression data)

CoexMap"824157"


athAT3G49950 | Entrez gene ID : 824157      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 6 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_190564.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 3  (predict for NP_190564.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_190564.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G49950

.
ath-m.4.bio
for
AT3G49950

.
ath-m.4.hor
for
AT3G49950

.
ath-m.4.lig
for
AT3G49950

.
ath-m.4.str
for
AT3G49950

.
ath-m.4.tis
for
AT3G49950

.
gma-u.5
for
100814364

.
gma-u.5
for
100808898

.
vvi-u.5
for
100252691

.
ppo-u.5
for
18101128

.
mtr-u.5
for
11411849

.
sly-u.5
for
GRAS26

.
osa-u.5
for
4343769

.
zma-u.5
for
103647799

.
zma-u.5
for
100281784

.


Ortholog ID: 7245
Species gma gma sly osa zma zma bra vvi ppo mtr hvu ghi ghi sbi sot bdi nta nta
Symbol LOC100814364 LOC100808898 GRAS26 LOC4343769 LOC103647799 LOC100281784 LOC103840915 LOC100252691 LOC18101128 LOC11411849 LOC123429766 LOC107941897 LOC107913272 LOC8078983 LOC102605907 LOC100828968 LOC107759552 LOC107824099
Function* scarecrow-like protein 32 scarecrow-like protein 32 GRAS transcription factor GRAS26 scarecrow-like protein 32 scarecrow-like protein 32 GRAS family transcription factor containing protein scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32 scarecrow-like protein 32
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma00941 Flavonoid biosynthesis 2
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00052 Galactose metabolism 3
sbi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100814364 100808898 101257522 4343769 103647799 100281784 103840915 100252691 18101128 11411849 123429766 107941897 107913272 8078983 102605907 100828968 107759552 107824099
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