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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT4G15475   F-box/RNI-like superfamily protein 
 ath-u.5   AT4G15475   F-box/RNI-like superfamily protein 
 ath-r.7   AT4G15475   F-box/RNI-like superfamily protein 
 ath-m.9   AT4G15475   F-box/RNI-like superfamily protein 
 ath-e.2   AT4G15475   F-box/RNI-like superfamily protein 
 ath-m.4.hor   AT4G15475   F-box/RNI-like superfamily protein 
 ath-m.4.lig   AT4G15475   F-box/RNI-like superfamily protein 
 ath-m.4.str   AT4G15475   F-box/RNI-like superfamily protein 
 ath-m.4.tis   AT4G15475   F-box/RNI-like superfamily protein 
 bra-r.6   103860783   F-box/LRR-repeat protein 4 
 bna-r.1   106401790   F-box/LRR-repeat protein 4-like 
 bna-r.1   106440041   F-box/LRR-repeat protein 4 
 ghi-r.1   107929132   F-box/LRR-repeat protein 4 
 ghi-r.1   121206395   F-box/LRR-repeat protein 4 
 cit-r.1   102630803   F-box/LRR-repeat protein 4 
 gma-u.5   100816140   F-box/LRR-repeat protein 4 
 gma-u.5   100812999   F-box/LRR-repeat protein 4 
 gma-u.5   100777126   F-box/LRR-repeat protein 4 
 vvi-u.5   100254543   F-box/LRR-repeat protein 4 
 mtr-u.5   11446125   F-box/LRR-repeat protein 4 
 sly-u.5   101264732   F-box/LRR-repeat protein 4 
 sot-r.1   102605788   F-box/LRR-repeat protein 4 
 nta-r.1   107806291   uncharacterized LOC107806291 
 nta-r.1   107769148   uncharacterized LOC107769148 
 osa-u.5   4348113   F-box/LRR-repeat protein 4 
 osa-u.5   4351003   F-box/LRR-repeat protein 4 
 zma-u.5   100382166   uncharacterized LOC100382166 
 tae-r.2   123091802   F-box/LRR-repeat protein 4 
 tae-r.2   123085891   F-box/LRR-repeat protein 4 
 tae-r.2   123096926   F-box/LRR-repeat protein 4 
 hvu-r.1   123448457   F-box/LRR-repeat protein 4 
 sbi-r.1   8079163   F-box/LRR-repeat protein 4 
 bdi-r.1   100843200   F-box/LRR-repeat protein 4 
 cre-r.1   CHLRE_14g624000v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G15475 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G15475 (ath-m.4.bio coexpression data)

CoexMap"827219"


athAT4G15475 | Entrez gene ID : 827219      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 9 1 2 2 1 3 1 1 1 1 2 2 1 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010225 [list] [network] response to UV-C  (15 genes)  IMP  
GO:0006289 [list] [network] nucleotide-excision repair  (18 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_567467.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  cysk 1,  golg 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_567467.1)
Subcellular
localization
TargetP
other 8  (predict for NP_567467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT4G15475
ath-u.5
for
AT4G15475
ath-r.7
for
AT4G15475
ath-m.9
for
AT4G15475
ath-e.2
for
AT4G15475
ath-m.4.hor
for
AT4G15475
ath-m.4.lig
for
AT4G15475
ath-m.4.str
for
AT4G15475
ath-m.4.tis
for
AT4G15475
bra-r.6
for
103860783
bna-r.1
for
106401790
bna-r.1
for
106440041
ghi-r.1
for
107929132
ghi-r.1
for
121206395
cit-r.1
for
102630803
gma-u.5
for
100816140
gma-u.5
for
100812999
gma-u.5
for
100777126
vvi-u.5
for
100254543
mtr-u.5
for
11446125
sly-u.5
for
101264732
sot-r.1
for
102605788
nta-r.1
for
107806291
nta-r.1
for
107769148
osa-u.5
for
4348113
osa-u.5
for
4351003
zma-u.5
for
100382166
tae-r.2
for
123091802
tae-r.2
for
123085891
tae-r.2
for
123096926
hvu-r.1
for
123448457
sbi-r.1
for
8079163
bdi-r.1
for
100843200
cre-r.1
for
CHLRE_14g624000v5


Ortholog ID: 9578
Species ath bra bna bna ghi ghi cit gma gma gma vvi mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol AT4G15475 LOC103860783 LOC106401790 LOC106440041 LOC107929132 LOC121206395 LOC102630803 LOC100816140 LOC100812999 LOC100777126 LOC100254543 LOC11446125 LOC101264732 LOC102605788 LOC107806291 LOC107769148 LOC4348113 LOC4351003 LOC100382166 LOC123091802 LOC123085891 LOC123096926 LOC123448457 LOC8079163 LOC100843200 CHLRE_14g624000v5
Function* F-box/RNI-like superfamily protein F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4-like F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 uncharacterized LOC107806291 uncharacterized LOC107769148 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 uncharacterized LOC100382166 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827219 103860783 106401790 106440041 107929132 121206395 102630803 100816140 100812999 100777126 100254543 11446125 101264732 102605788 107806291 107769148 4348113 4351003 100382166 123091802 123085891 123096926 123448457 8079163 100843200 5718309
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