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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-u.5   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-r.7   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.9   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-e.2   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.hor   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.lig   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.str   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.tis   AT4G03120   C2H2 and C2HC zinc fingers superfamily protein 
 bra-r.6   103868273   U1 small nuclear ribonucleoprotein C-like 
 bra-r.6   103858717   U1 small nuclear ribonucleoprotein C 
 bra-r.6   103846873   U1 small nuclear ribonucleoprotein C 
 bna-r.1   106431495   U1 small nuclear ribonucleoprotein C-like 
 bna-r.1   106404864   U1 small nuclear ribonucleoprotein C-like 
 bna-r.1   106392296   U1 small nuclear ribonucleoprotein C-like 
 ghi-r.1   107912393   U1 small nuclear ribonucleoprotein C 
 ghi-r.1   107924596   U1 small nuclear ribonucleoprotein C 
 ghi-r.1   107949854   U1 small nuclear ribonucleoprotein C 
 cit-r.1   102624033   U1 small nuclear ribonucleoprotein C 
 gma-u.5   100795821   U1 small nuclear ribonucleoprotein C 
 gma-u.5   100790892   U1 small nuclear ribonucleoprotein C 
 vvi-u.5   100263028   U1 small nuclear ribonucleoprotein C-like 
 ppo-u.5   7475730   U1 small nuclear ribonucleoprotein C 
 mtr-u.5   25484788   U1 small nuclear ribonucleoprotein C 
 mtr-u.5   25499578   U1 small nuclear ribonucleoprotein C 
 sly-u.5   778316   U1 small nuclear ribonucleoprotein C-like 
 sly-u.5   101263748   U1 small nuclear ribonucleoprotein C-like 
 sot-r.1   102605266   U1 small nuclear ribonucleoprotein C-like 
 sot-r.1   102580993   U1 small nuclear ribonucleoprotein C-like 
 nta-r.1   107828655   U1 small nuclear ribonucleoprotein C-like 
 nta-r.1   107794241   U1 small nuclear ribonucleoprotein C 
 nta-r.1   107779042   U1 small nuclear ribonucleoprotein C 
 osa-u.5   4328958   U1 small nuclear ribonucleoprotein C-1 
 zma-u.5   100192596   uncharacterized LOC100192596 
 tae-r.2   123144527   U1 small nuclear ribonucleoprotein C-1 
 tae-r.2   123127464   U1 small nuclear ribonucleoprotein C-1 
 tae-r.2   123137225   U1 small nuclear ribonucleoprotein C-1 
 hvu-r.1   123401927   U1 small nuclear ribonucleoprotein C-1-like 
 sbi-r.1   8078373   U1 small nuclear ribonucleoprotein C-1 
 sbi-r.1   8068597   U1 small nuclear ribonucleoprotein C-2 
 bdi-r.1   100822246   U1 small nuclear ribonucleoprotein C-1 
 cre-r.1   CHLRE_09g401300v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G03120 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G03120 (ath-m.4.bio coexpression data)

CoexMap"828071"


athAT4G03120 | Entrez gene ID : 828071      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 2 1 1 2 2 2 3 1 1 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03040 [list] [network] Spliceosome (243 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_567250.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_567250.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_567250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT4G03120
ath-u.5
for
AT4G03120
ath-r.7
for
AT4G03120
ath-m.9
for
AT4G03120
ath-e.2
for
AT4G03120
ath-m.4.hor
for
AT4G03120
ath-m.4.lig
for
AT4G03120
ath-m.4.str
for
AT4G03120
ath-m.4.tis
for
AT4G03120
bra-r.6
for
103868273
bra-r.6
for
103858717
bra-r.6
for
103846873
bna-r.1
for
106431495
bna-r.1
for
106404864
bna-r.1
for
106392296
ghi-r.1
for
107912393
ghi-r.1
for
107924596
ghi-r.1
for
107949854
cit-r.1
for
102624033
gma-u.5
for
100795821
gma-u.5
for
100790892
vvi-u.5
for
100263028
ppo-u.5
for
7475730
mtr-u.5
for
25484788
mtr-u.5
for
25499578
sly-u.5
for
778316
sly-u.5
for
101263748
sot-r.1
for
102605266
sot-r.1
for
102580993
nta-r.1
for
107828655
nta-r.1
for
107794241
nta-r.1
for
107779042
osa-u.5
for
4328958
zma-u.5
for
100192596
tae-r.2
for
123144527
tae-r.2
for
123127464
tae-r.2
for
123137225
hvu-r.1
for
123401927
sbi-r.1
for
8078373
sbi-r.1
for
8068597
bdi-r.1
for
100822246
cre-r.1
for
CHLRE_09g401300v5


Ortholog ID: 5348
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi sbi bdi cre
Symbol AT4G03120 LOC103868273 LOC103858717 LOC103846873 LOC106431495 LOC106404864 LOC106381209 LOC107924596 LOC107949854 LOC107953202 LOC102624033 LOC100795821 LOC100790892 LOC100263028 LOC7475730 LOC25484788 LOC25499578 LOC778316 LOC101263748 LOC102605266 LOC102580993 LOC107828655 LOC107794241 LOC142179358 LOC4328958 LOC100192596 LOC123144527 LOC123127464 LOC123137225 LOC123401927 LOC8078373 LOC8068597 LOC100822246 CHLRE_09g401300v5
Function* C2H2 and C2HC zinc fingers superfamily protein U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C U1 small nuclear ribonucleoprotein C-like U1 small nuclear ribonucleoprotein C-1 uncharacterized LOC100192596 U1 small nuclear ribonucleoprotein C-1 U1 small nuclear ribonucleoprotein C-1 U1 small nuclear ribonucleoprotein C-1 U1 small nuclear ribonucleoprotein C-1-like U1 small nuclear ribonucleoprotein C-1 U1 small nuclear ribonucleoprotein C-2 U1 small nuclear ribonucleoprotein C-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03010 Ribosome 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03010 Ribosome 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03040 Spliceosome 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot04120 Ubiquitin mediated proteolysis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 2
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03040 Spliceosome 3
tae03060 Protein export 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 9
cre04145 Phagosome 9
cre03040 Spliceosome 3
cre04142 Lysosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828071 103868273 103858717 103846873 106431495 106404864 106381209 107924596 107949854 107953202 102624033 100795821 100790892 100263028 7475730 25484788 25499578 778316 101263748 102605266 102580993 107828655 107794241 142179358 4328958 100192596 123144527 123127464 123137225 123401927 8078373 8068597 100822246 5720710
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