Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT4G31880   transcriptional regulator 
 ath-u.5   AT4G31880   transcriptional regulator 
 ath-r.7   AT4G31880   transcriptional regulator 
 ath-m.9   AT4G31880   transcriptional regulator 
 ath-e.2   AT4G31880   transcriptional regulator 
 ath-m.4.hor   AT4G31880   transcriptional regulator 
 ath-m.4.lig   AT4G31880   transcriptional regulator 
 ath-m.4.str   AT4G31880   transcriptional regulator 
 ath-m.4.tis   AT4G31880   transcriptional regulator 
 ath-u.5   AT5G10950   Tudor/PWWP/MBT superfamily protein 
 ath-u.5   AT1G15940   Tudor/PWWP/MBT superfamily protein 
 ath-u.5   AT1G80810   Tudor/PWWP/MBT superfamily protein 
 bra-r.6   103855892   DEAD-box ATP-dependent RNA helicase 28 
 bra-r.6   103832454   glutamic acid-rich protein 
 bna-r.1   106420502   sister chromatid cohesion protein PDS5 homolog C-like 
 bna-r.1   106423380   sister chromatid cohesion protein PDS5 homolog C 
 bna-r.1   106430116   sister chromatid cohesion protein PDS5 homolog D 
 ghi-r.1   107958994   midasin 
 ghi-r.1   107958995   E3 ubiquitin-protein ligase RBBP6 
 ghi-r.1   107961680   uncharacterized LOC107961680 
 cit-r.1   102614026   sister chromatid cohesion protein PDS5 homolog C-like 
 cit-r.1   102624143   sister chromatid cohesion protein PDS5 homolog C 
 gma-u.5   100527580   uncharacterized LOC100527580 
 vvi-u.5   100248351   sister chromatid cohesion protein PDS5 homolog C 
 vvi-u.5   100260975   sister chromatid cohesion protein PDS5 homolog C 
 ppo-u.5   18100706   sister chromatid cohesion protein PDS5 homolog C 
 ppo-u.5   7493403   uncharacterized LOC7493403 
 ppo-u.5   7487059   sister chromatid cohesion protein PDS5 homolog D 
 mtr-u.5   11423336   muscle M-line assembly protein unc-89 
 mtr-u.5   11437017   sister chromatid cohesion protein PDS5 
 mtr-u.5   11442229   triadin 
 sly-u.5   101254292   sister chromatid cohesion protein PDS5 homolog D-like 
 sly-u.5   101253678   sister chromatid cohesion protein PDS5 homolog D-like 
 sot-r.1   102586851   uncharacterized LOC102586851 
 sot-r.1   102596055   uncharacterized LOC102596055 
 sot-r.1   102606228   uncharacterized LOC102606228 
 nta-r.1   107805389   sister chromatid cohesion protein PDS5 homolog D 
 nta-r.1   107809834   sister chromatid cohesion protein PDS5 homolog D 
 nta-r.1   107818446   sister chromatid cohesion protein PDS5 homolog D-like 
 osa-u.5   9266945   sister chromatid cohesion protein PDS5 homolog C 
 osa-u.5   4329966   sister chromatid cohesion protein PDS5 homolog C 
 osa-u.5   4335488   sister chromatid cohesion protein PDS5 homolog D 
 zma-u.5   103654690   sister chromatid cohesion protein PDS5 homolog B-B-like 
 zma-u.5   103653756   uncharacterized LOC103653756 
 zma-u.5   103646255   titin homolog 
 tae-r.2   123053807   nucleolar protein dao-5 
 tae-r.2   123144807   neurofilament heavy polypeptide 
 tae-r.2   123045941   nucleolar protein dao-5 
 hvu-r.1   123427162   ABC transporter F family member 4-like 
 hvu-r.1   123401818   neurofilament heavy polypeptide-like 
 sbi-r.1   8071467   MATH and LRR domain-containing protein PFE0570w 
 sbi-r.1   8060213   enolase-phosphatase E1 
 sbi-r.1   8059675   microtubule-associated protein futsch 
 bdi-r.1   100825062   uncharacterized LOC100825062 
 bdi-r.1   100823597   muscle M-line assembly protein unc-89 
 cre-r.1   CHLRE_02g099601v5   uncharacterized protein 
 cre-r.1   CHLRE_01g032550v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT4G31880 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT4G31880 (ath-m.4.bio coexpression data)

CoexMap"829318"


athAT4G31880 | Entrez gene ID : 829318      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 2 3 3 2 1 2 3 3 2 3 3 3 3 3 2 3 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (13 genes)  IMP  
GO:0009556 [list] [network] microsporogenesis  (28 genes)  IGI  
GO:0035825 [list] [network] homologous recombination  (50 genes)  IMP  
GO:0006310 [list] [network] DNA recombination  (113 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IGI IMP  
GO:0010468 [list] [network] regulation of gene expression  (2062 genes)  IGI  
GO CC
GO:0005874 [list] [network] microtubule  (116 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001190882.1 [sequence] [blastp]
NP_194916.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001190882.1)
nucl 9  (predict for NP_194916.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001190882.1)
other 9  (predict for NP_194916.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT4G31880
ath-u.5
for
AT4G31880
ath-r.7
for
AT4G31880
ath-m.9
for
AT4G31880
ath-e.2
for
AT4G31880
ath-m.4.hor
for
AT4G31880
ath-m.4.lig
for
AT4G31880
ath-m.4.str
for
AT4G31880
ath-m.4.tis
for
AT4G31880
ath-u.5
for
AT5G10950
ath-u.5
for
AT1G15940
ath-u.5
for
AT1G80810
bra-r.6
for
103855892
bra-r.6
for
103832454
bna-r.1
for
106420502
bna-r.1
for
106423380
bna-r.1
for
106430116
ghi-r.1
for
107958994
ghi-r.1
for
107958995
ghi-r.1
for
107961680
cit-r.1
for
102614026
cit-r.1
for
102624143
gma-u.5
for
100527580
vvi-u.5
for
100248351
vvi-u.5
for
100260975
ppo-u.5
for
18100706
ppo-u.5
for
7493403
ppo-u.5
for
7487059
mtr-u.5
for
11423336
mtr-u.5
for
11437017
mtr-u.5
for
11442229
sly-u.5
for
101254292
sly-u.5
for
101253678
sot-r.1
for
102586851
sot-r.1
for
102596055
sot-r.1
for
102606228
nta-r.1
for
107805389
nta-r.1
for
107809834
nta-r.1
for
107818446
osa-u.5
for
9266945
osa-u.5
for
4329966
osa-u.5
for
4335488
zma-u.5
for
103654690
zma-u.5
for
103653756
zma-u.5
for
103646255
tae-r.2
for
123053807
tae-r.2
for
123144807
tae-r.2
for
123045941
hvu-r.1
for
123427162
hvu-r.1
for
123401818
sbi-r.1
for
8071467
sbi-r.1
for
8060213
sbi-r.1
for
8059675
bdi-r.1
for
100825062
bdi-r.1
for
100823597
cre-r.1
for
CHLRE_02g099601v5
cre-r.1
for
CHLRE_01g032550v5


Ortholog ID: 597
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre cre
Symbol AT4G31880 AT1G15940 AT1G80810 LOC103855892 LOC103842872 LOC103862094 LOC106420502 LOC106430760 LOC106346800 LOC107953744 LOC107906838 LOC107906837 LOC102614026 LOC102624143 LOC100790092 LOC100812058 LOC100248351 LOC100260975 LOC7493403 LOC7487059 LOC7493222 LOC11423336 LOC11437017 LOC11442229 LOC101253678 LOC101246231 LOC102605879 LOC102591624 LOC102591295 LOC107830807 LOC107772436 LOC107767311 LOC9266945 LOC4335488 LOC4336311 LOC103654690 LOC103653756 LOC103646255 LOC123144807 LOC123045941 LOC123137451 LOC123427162 LOC123401818 LOC8071467 LOC8060213 LOC8059675 LOC100825062 LOC100823597 CHLRE_02g099601v5 CHLRE_01g032550v5
Function* transcriptional regulator Tudor/PWWP/MBT superfamily protein Tudor/PWWP/MBT superfamily protein DEAD-box ATP-dependent RNA helicase 28 cinnamoyl-CoA reductase 1 neurofilament heavy polypeptide sister chromatid cohesion protein PDS5 homolog C-like sister chromatid cohesion protein PDS5 homolog D-like sister chromatid cohesion protein PDS5 homolog E-like WASH complex subunit 2 triadin triadin sister chromatid cohesion protein PDS5 homolog C-like sister chromatid cohesion protein PDS5 homolog C muscle M-line assembly protein unc-89 uncharacterized LOC100812058 sister chromatid cohesion protein PDS5 homolog C sister chromatid cohesion protein PDS5 homolog C uncharacterized LOC7493403 sister chromatid cohesion protein PDS5 homolog D sister chromatid cohesion protein PDS5 homolog D muscle M-line assembly protein unc-89 sister chromatid cohesion protein PDS5 triadin sister chromatid cohesion protein PDS5 homolog D-like sister chromatid cohesion protein PDS5 homolog E muscle M-line assembly protein unc-89 uncharacterized LOC102591624 uncharacterized LOC102591295 sister chromatid cohesion protein PDS5 homolog D sister chromatid cohesion protein PDS5 homolog C-like sister chromatid cohesion protein PDS5 homolog D sister chromatid cohesion protein PDS5 homolog C sister chromatid cohesion protein PDS5 homolog D sister chromatid cohesion protein PDS5 homolog C sister chromatid cohesion protein PDS5 homolog B-B-like uncharacterized LOC103653756 titin homolog neurofilament heavy polypeptide nucleolar protein dao-5 neurofilament heavy polypeptide ABC transporter F family member 4-like neurofilament heavy polypeptide-like MATH and LRR domain-containing protein PFE0570w enolase-phosphatase E1 microtubule-associated protein futsch uncharacterized LOC100825062 muscle M-line assembly protein unc-89 uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03013 Nucleocytoplasmic transport 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03410 Base excision repair 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829318 838164 844420 103855892 103842872 103862094 106420502 106430760 106346800 107953744 107906838 107906837 102614026 102624143 100790092 100812058 100248351 100260975 7493403 7487059 7493222 11423336 11437017 11442229 101253678 101246231 102605879 102591624 102591295 107830807 107772436 107767311 9266945 4335488 4336311 103654690 103653756 103646255 123144807 123045941 123137451 123427162 123401818 8071467 8060213 8059675 100825062 100823597 66052408 5715404
The preparation time of this page was 0.2 [sec].