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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   PRT6   proteolysis 6 
 ath-u.5   PRT6   proteolysis 6 
 ath-r.7   PRT6   proteolysis 6 
 ath-m.9   PRT6   proteolysis 6 
 ath-e.2   PRT6   proteolysis 6 
 ath-m.4.hor   PRT6   proteolysis 6 
 ath-m.4.lig   PRT6   proteolysis 6 
 ath-m.4.str   PRT6   proteolysis 6 
 ath-m.4.tis   PRT6   proteolysis 6 
 bra-r.6   103855459   E3 ubiquitin-protein ligase PRT6 
 bra-r.6   103850443   E3 ubiquitin-protein ligase PRT6 
 bra-r.6   103847459   E3 ubiquitin-protein ligase PRT6 
 bna-r.1   106372576   E3 ubiquitin-protein ligase PRT6-like 
 bna-r.1   106424042   E3 ubiquitin-protein ligase PRT6-like 
 bna-r.1   106429041   E3 ubiquitin-protein ligase PRT6 
 ghi-r.1   107958010   E3 ubiquitin-protein ligase PRT6 
 ghi-r.1   107889688   E3 ubiquitin-protein ligase PRT6 
 ghi-r.1   107891054   E3 ubiquitin-protein ligase PRT6 
 cit-r.1   102617693   E3 ubiquitin-protein ligase PRT6 
 gma-u.5   100818009   E3 ubiquitin-protein ligase PRT6 
 gma-u.5   100805660   E3 ubiquitin-protein ligase PRT6 
 vvi-u.5   100245881   E3 ubiquitin-protein ligase PRT6 
 ppo-u.5   7454927   E3 ubiquitin-protein ligase PRT6 
 mtr-u.5   11409414   E3 ubiquitin-protein ligase PRT6 
 sly-u.5   101255129   E3 ubiquitin-protein ligase PRT6 
 sly-u.5   101261865   E3 ubiquitin-protein ligase PRT6 
 sot-r.1   102603446   E3 ubiquitin-protein ligase PRT6 
 sot-r.1   102594606   E3 ubiquitin-protein ligase PRT6-like 
 nta-r.1   107820058   E3 ubiquitin-protein ligase PRT6 
 nta-r.1   107829718   E3 ubiquitin-protein ligase PRT6 
 nta-r.1   107797361   E3 ubiquitin-protein ligase PRT6 
 osa-u.5   4325212   E3 ubiquitin-protein ligase PRT6 
 zma-u.5   100192707   uncharacterized LOC100192707 
 tae-r.2   123060129   E3 ubiquitin-protein ligase PRT6 
 tae-r.2   123060139   E3 ubiquitin-protein ligase PRT6 
 tae-r.2   123068599   E3 ubiquitin-protein ligase PRT6 
 hvu-r.1   123442688   E3 ubiquitin-protein ligase PRT6-like 
 hvu-r.1   123442682   E3 ubiquitin-protein ligase PRT6-like 
 sbi-r.1   8073304   E3 ubiquitin-protein ligase PRT6 
 bdi-r.1   100845375   E3 ubiquitin-protein ligase PRT6 
 cre-r.1   CHLRE_02g089237v5   uncharacterized protein 

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Top 50 coexpressed genes to PRT6 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PRT6 (ath-m.4.bio coexpression data)

CoexMap"830916"


athPRT6 | Entrez gene ID : 830916      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 2 1 1 1 2 2 3 1 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0050994 [list] [network] regulation of lipid catabolic process  (10 genes)  IMP  
GO:0010025 [list] [network] wax biosynthetic process  (30 genes)  IMP  
GO:0010029 [list] [network] regulation of seed germination  (105 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IDA  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IDA  
Protein NP_001318457.1 [sequence] [blastp]
NP_001331954.1 [sequence] [blastp]
NP_195851.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  nucl 2,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001318457.1)
plas 7,  nucl 1,  E.R. 1  (predict for NP_001331954.1)
plas 6,  nucl 2,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_195851.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001318457.1)
other 5,  mito 3  (predict for NP_001331954.1)
other 8  (predict for NP_195851.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
PRT6
ath-u.5
for
PRT6
ath-r.7
for
PRT6
ath-m.9
for
PRT6
ath-e.2
for
PRT6
ath-m.4.hor
for
PRT6
ath-m.4.lig
for
PRT6
ath-m.4.str
for
PRT6
ath-m.4.tis
for
PRT6
bra-r.6
for
103855459
bra-r.6
for
103850443
bra-r.6
for
103847459
bna-r.1
for
106372576
bna-r.1
for
106424042
bna-r.1
for
106429041
ghi-r.1
for
107958010
ghi-r.1
for
107889688
ghi-r.1
for
107891054
cit-r.1
for
102617693
gma-u.5
for
100818009
gma-u.5
for
100805660
vvi-u.5
for
100245881
ppo-u.5
for
7454927
mtr-u.5
for
11409414
sly-u.5
for
101255129
sly-u.5
for
101261865
sot-r.1
for
102603446
sot-r.1
for
102594606
nta-r.1
for
107820058
nta-r.1
for
107829718
nta-r.1
for
107797361
osa-u.5
for
4325212
zma-u.5
for
100192707
tae-r.2
for
123060129
tae-r.2
for
123060139
tae-r.2
for
123068599
hvu-r.1
for
123442688
hvu-r.1
for
123442682
sbi-r.1
for
8073304
bdi-r.1
for
100845375
cre-r.1
for
CHLRE_02g089237v5


Ortholog ID: 4437
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol PRT6 LOC103855459 LOC103850443 LOC103847459 LOC106372576 LOC106429041 LOC106448753 LOC107889688 LOC107893857 LOC107939925 LOC102617693 LOC100818009 LOC100805660 LOC100245881 LOC7454927 LOC11409414 LOC101255129 LOC101261865 LOC102603446 LOC102594606 LOC107820058 LOC107829718 LOC107797361 LOC4325212 LOC100192707 LOC123060129 LOC123077144 LOC123077134 LOC123442688 LOC8073304 LOC100845375 CHLRE_02g089237v5
Function* proteolysis 6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6-like E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6-like E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 uncharacterized LOC100192707 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6-like E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 5
ath03082 ATP-dependent chromatin remodeling 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna04712 Circadian rhythm - plant 2
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna04712 Circadian rhythm - plant 2
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03013 Nucleocytoplasmic transport 3
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830916 103855459 103850443 103847459 106372576 106429041 106448753 107889688 107893857 107939925 102617693 100818009 100805660 100245881 7454927 11409414 101255129 101261865 102603446 102594606 107820058 107829718 107797361 4325212 100192707 123060129 123077144 123077134 123442688 8073304 100845375 66052302
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