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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-u.5   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-r.7   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.9   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-e.2   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.hor   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.lig   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.str   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.tis   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 bra-r.6   103860531   G patch domain-containing protein TGH 
 bra-r.6   103837348   G patch domain-containing protein TGH 
 bna-r.1   106374036   G patch domain-containing protein TGH 
 bna-r.1   106360523   G patch domain-containing protein TGH-like 
 bna-r.1   106366057   G patch domain-containing protein TGH-like 
 ghi-r.1   107949739   G patch domain-containing protein TGH 
 ghi-r.1   107887061   G patch domain-containing protein TGH 
 cit-r.1   102624586   G patch domain-containing protein TGH 
 gma-u.5   100796934   G patch domain-containing protein TGH 
 gma-u.5   100500422   uncharacterized LOC100500422 
 vvi-u.5   100242404   G patch domain-containing protein TGH 
 ppo-u.5   7490080   G patch domain-containing protein TGH 
 mtr-u.5   11441585   G patch domain-containing protein TGH 
 sly-u.5   101243875   G patch domain-containing protein TGH 
 sot-r.1   102599029   G patch domain-containing protein TGH 
 nta-r.1   107789035   G patch domain-containing protein TGH 
 nta-r.1   107808070   G patch domain-containing protein TGH 
 osa-u.5   4341077   G patch domain-containing protein TGH homolog 
 zma-u.5   103638373   G patch domain-containing protein TGH homolog 
 tae-r.2   123164435   G patch domain-containing protein TGH homolog 
 tae-r.2   123156409   G patch domain-containing protein TGH homolog 
 tae-r.2   123150748   G patch domain-containing protein TGH homolog 
 hvu-r.1   123412942   G patch domain-containing protein TGH homolog 
 sbi-r.1   8078300   G patch domain-containing protein TGH homolog 
 bdi-r.1   100831112   G patch domain-containing protein TGH homolog 
 cre-r.1   CHLRE_13g568700v5   uncharacterized protein 

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Top 50 coexpressed genes to TGH (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TGH (ath-m.4.bio coexpression data)

CoexMap"832372"


athTGH | Entrez gene ID : 832372      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035196 [list] [network] miRNA processing  (30 genes)  IMP  
GO:0030422 [list] [network] siRNA processing  (31 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0009926 [list] [network] auxin polar transport  (72 genes)  IMP  
GO:0010087 [list] [network] phloem or xylem histogenesis  (125 genes)  IMP  
GO:0006396 [list] [network] RNA processing  (588 genes)  TAS  
GO:0007275 [list] [network] multicellular organism development  (2630 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0070883 [list] [network] pre-miRNA binding  (1 genes)  IDA  
GO:0070878 [list] [network] primary miRNA binding  (3 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031926.1 [sequence] [blastp]
NP_197699.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001031926.1)
nucl 10  (predict for NP_197699.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001031926.1)
other 9  (predict for NP_197699.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
TGH
ath-u.5
for
TGH
ath-r.7
for
TGH
ath-m.9
for
TGH
ath-e.2
for
TGH
ath-m.4.hor
for
TGH
ath-m.4.lig
for
TGH
ath-m.4.str
for
TGH
ath-m.4.tis
for
TGH
bra-r.6
for
103860531
bra-r.6
for
103837348
bna-r.1
for
106374036
bna-r.1
for
106360523
bna-r.1
for
106366057
ghi-r.1
for
107949739
ghi-r.1
for
107887061
cit-r.1
for
102624586
gma-u.5
for
100796934
gma-u.5
for
100500422
vvi-u.5
for
100242404
ppo-u.5
for
7490080
mtr-u.5
for
11441585
sly-u.5
for
101243875
sot-r.1
for
102599029
nta-r.1
for
107789035
nta-r.1
for
107808070
osa-u.5
for
4341077
zma-u.5
for
103638373
tae-r.2
for
123164435
tae-r.2
for
123156409
tae-r.2
for
123150748
hvu-r.1
for
123412942
sbi-r.1
for
8078300
bdi-r.1
for
100831112
cre-r.1
for
CHLRE_13g568700v5


Ortholog ID: 8617
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol TGH LOC103860531 LOC103837348 LOC106374036 LOC106360523 LOC106366057 LOC107949739 LOC107887061 LOC102624586 LOC100796934 LOC100500422 LOC100242404 LOC7490080 LOC11441585 LOC101243875 LOC102599029 LOC107789035 LOC107808070 LOC4341077 LOC103638373 LOC123164435 LOC123156409 LOC123150748 LOC123412942 LOC8078300 LOC100831112 CHLRE_13g568700v5
Function* SWAP (Suppressor-of-White-APricot)/surp domain-containing protein G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH-like G patch domain-containing protein TGH-like G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH uncharacterized LOC100500422 G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832372 103860531 103837348 106374036 106360523 106366057 107949739 107887061 102624586 100796934 100500422 100242404 7490080 11441585 101243875 102599029 107789035 107808070 4341077 103638373 123164435 123156409 123150748 123412942 8078300 100831112 5719096
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