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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT5G49710   RING finger protein 
 ath-u.5   AT5G49710   RING finger protein 
 ath-r.7   AT5G49710   RING finger protein 
 ath-m.9   AT5G49710   RING finger protein 
 ath-e.2   AT5G49710   RING finger protein 
 ath-m.4.hor   AT5G49710   RING finger protein 
 ath-m.4.lig   AT5G49710   RING finger protein 
 ath-m.4.str   AT5G49710   RING finger protein 
 ath-m.4.tis   AT5G49710   RING finger protein 
 ath-u.5   AT4G24590   RING finger protein 
 bra-r.6   103862320   uncharacterized LOC103862320 
 bra-r.6   103861497   uncharacterized LOC103861497 
 bna-r.1   BNAA01G13970D   uncharacterized BNAA01G13970D 
 bna-r.1   125590099   uncharacterized LOC125590099 
 bna-r.1   BNAC01G16470D   uncharacterized BNAC01G16470D 
 ghi-r.1   107957530   uncharacterized LOC107957530 
 ghi-r.1   107905053   uncharacterized LOC107905053 
 ghi-r.1   107900676   uncharacterized LOC107900676 
 cit-r.1   102627919   uncharacterized LOC102627919 
 gma-u.5   100817903   uncharacterized LOC100817903 
 gma-u.5   100790753   uncharacterized LOC100790753 
 gma-u.5   100779584   valine--tRNA ligase 
 vvi-u.5   100267834   uncharacterized LOC100267834 
 ppo-u.5   7486559   uncharacterized LOC7486559 
 ppo-u.5   7467193   uncharacterized LOC7467193 
 mtr-u.5   11426027   uncharacterized LOC11426027 
 sly-u.5   101250398   uncharacterized LOC101250398 
 sot-r.1   102585183   uncharacterized LOC102585183 
 nta-r.1   107789233   uncharacterized LOC107789233 
 nta-r.1   107792374   uncharacterized LOC107792374 
 osa-u.5   4330928   uncharacterized LOC4330928 
 osa-u.5   4347310   uncharacterized LOC4347310 
 zma-u.5   103627822   MADS box interactor-like 
 zma-u.5   103634599   uncharacterized LOC103634599 
 zma-u.5   100191205   MADS box interactor-like 
 tae-r.2   123128640   uncharacterized LOC123128640 
 tae-r.2   123138533   uncharacterized LOC123138533 
 tae-r.2   123121779   uncharacterized LOC123121779 
 hvu-r.1   123398934   uncharacterized LOC123398934 
 hvu-r.1   123402700   uncharacterized LOC123402700 
 sbi-r.1   8063723   uncharacterized LOC8063723 
 sbi-r.1   8082691   uncharacterized LOC8082691 
 bdi-r.1   100833711   uncharacterized LOC100833711 
 bdi-r.1   100827724   uncharacterized LOC100827724 
 cre-r.1   CHLRE_06g278271v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G49710 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G49710 (ath-m.4.bio coexpression data)

CoexMap"835034"


athAT5G49710 | Entrez gene ID : 835034      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 3 1 2 1 1 1 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_199782.3 [sequence] [blastp]
NP_974916.1 [sequence] [blastp]
NP_974917.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 1,  chlo 1,  cyto 1,  plas 1,  pero 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_199782.3)
nucl 9,  cyto_nucl 5  (predict for NP_974916.1)
nucl 6,  cysk 1,  chlo 1,  plas 1,  pero 1  (predict for NP_974917.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199782.3)
other 8  (predict for NP_974916.1)
other 8  (predict for NP_974917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT5G49710
ath-u.5
for
AT5G49710
ath-r.7
for
AT5G49710
ath-m.9
for
AT5G49710
ath-e.2
for
AT5G49710
ath-m.4.hor
for
AT5G49710
ath-m.4.lig
for
AT5G49710
ath-m.4.str
for
AT5G49710
ath-m.4.tis
for
AT5G49710
ath-u.5
for
AT4G24590
bra-r.6
for
103862320
bra-r.6
for
103861497
bna-r.1
for
BNAA01G13970D
bna-r.1
for
125590099
bna-r.1
for
BNAC01G16470D
ghi-r.1
for
107957530
ghi-r.1
for
107905053
ghi-r.1
for
107900676
cit-r.1
for
102627919
gma-u.5
for
100817903
gma-u.5
for
100790753
gma-u.5
for
100779584
vvi-u.5
for
100267834
ppo-u.5
for
7486559
ppo-u.5
for
7467193
mtr-u.5
for
11426027
sly-u.5
for
101250398
sot-r.1
for
102585183
nta-r.1
for
107789233
nta-r.1
for
107792374
osa-u.5
for
4330928
osa-u.5
for
4347310
zma-u.5
for
103627822
zma-u.5
for
103634599
zma-u.5
for
100191205
tae-r.2
for
123128640
tae-r.2
for
123138533
tae-r.2
for
123121779
hvu-r.1
for
123398934
hvu-r.1
for
123402700
sbi-r.1
for
8063723
sbi-r.1
for
8082691
bdi-r.1
for
100833711
bdi-r.1
for
100827724
cre-r.1
for
CHLRE_06g278271v5


Ortholog ID: 4271
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT5G49710 AT4G24590 LOC103862320 LOC103861497 LOC125590099 BNAC01G16470D LOC106440790 LOC107957530 LOC107905053 LOC107900676 LOC102627919 LOC100817903 LOC100790753 LOC100779584 LOC100267834 LOC7486559 LOC7467193 LOC11426027 LOC101250398 LOC102585183 LOC107789233 LOC107792374 LOC4330928 LOC4347310 LOC103627822 LOC103634599 LOC109942654 LOC123128640 LOC123112262 LOC123104031 LOC123398934 LOC123402700 LOC8063723 LOC8082691 LOC100833711 LOC100827724 CHLRE_06g278271v5
Function* RING finger protein RING finger protein uncharacterized LOC103862320 uncharacterized LOC103861497 uncharacterized LOC125590099 uncharacterized BNAC01G16470D uncharacterized LOC106440790 uncharacterized LOC107957530 uncharacterized LOC107905053 uncharacterized LOC107900676 uncharacterized LOC102627919 uncharacterized LOC100817903 uncharacterized LOC100790753 valine--tRNA ligase uncharacterized LOC100267834 uncharacterized LOC7486559 uncharacterized LOC7467193 uncharacterized LOC11426027 uncharacterized LOC101250398 uncharacterized LOC102585183 uncharacterized LOC107789233 uncharacterized LOC107792374 uncharacterized LOC4330928 uncharacterized LOC4347310 MADS box interactor-like uncharacterized LOC103634599 uncharacterized LOC109942654 uncharacterized LOC123128640 uncharacterized LOC123112262 uncharacterized LOC123104031 uncharacterized LOC123398934 uncharacterized LOC123402700 uncharacterized LOC8063723 uncharacterized LOC8082691 uncharacterized LOC100833711 uncharacterized LOC100827724 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi03272 Virion - Hepatitis viruses 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 8
ghi03272 Virion - Hepatitis viruses 6
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi03272 Virion - Hepatitis viruses 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04130 SNARE interactions in vesicular transport 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 3
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 3
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835034 828561 103862320 103861497 125590099 106391305 106440790 107957530 107905053 107900676 102627919 100817903 100790753 100779584 100267834 7486559 7467193 11426027 101250398 102585183 107789233 107792374 4330928 4347310 103627822 103634599 109942654 123128640 123112262 123104031 123398934 123402700 8063723 8082691 100833711 100827724 5723603
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