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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT5G54750   Transport protein particle (TRAPP) component 
 ath-u.5   AT5G54750   Transport protein particle (TRAPP) component 
 ath-r.7   AT5G54750   Transport protein particle (TRAPP) component 
 ath-m.9   AT5G54750   Transport protein particle (TRAPP) component 
 ath-e.2   AT5G54750   Transport protein particle (TRAPP) component 
 ath-m.4.hor   AT5G54750   Transport protein particle (TRAPP) component 
 ath-m.4.lig   AT5G54750   Transport protein particle (TRAPP) component 
 ath-m.4.str   AT5G54750   Transport protein particle (TRAPP) component 
 ath-m.4.tis   AT5G54750   Transport protein particle (TRAPP) component 
 bra-r.6   103839271   trafficking protein particle complex subunit 3 
 bna-r.1   106402445   trafficking protein particle complex subunit 3 
 bna-r.1   106447069   trafficking protein particle complex subunit 3 
 ghi-r.1   107891361   trafficking protein particle complex subunit 3 
 ghi-r.1   107890090   trafficking protein particle complex subunit 3 
 cit-r.1   102628230   uncharacterized LOC102628230 
 gma-u.5   100499843   uncharacterized LOC100499843 
 gma-u.5   100306217   trafficking protein particle complex subunit 3-like 
 vvi-u.5   100241885   uncharacterized LOC100241885 
 ppo-u.5   18095911   uncharacterized LOC18095911 
 mtr-u.5   25500697   trafficking protein particle complex subunit 3 
 mtr-u.5   11441351   trafficking protein particle complex subunit 3 
 sly-u.5   101243746   uncharacterized LOC101243746 
 sly-u.5   101243742   trafficking protein particle complex subunit 3-like 
 sot-r.1   102586597   trafficking protein particle complex subunit 3-like 
 sot-r.1   102585954   trafficking protein particle complex subunit 3-like 
 nta-r.1   107829374   uncharacterized LOC107829374 
 nta-r.1   107803357   uncharacterized LOC107803357 
 nta-r.1   107803314   uncharacterized LOC107803314 
 osa-u.5   4333064   uncharacterized LOC4333064 
 osa-u.5   4344075   uncharacterized LOC4344075 
 zma-u.5   100285232   trafficking protein particle complex subunit 3 
 zma-u.5   100193521   uncharacterized LOC100193521 
 tae-r.2   123044012   trafficking protein particle complex subunit 3 
 tae-r.2   123051889   trafficking protein particle complex subunit 3 
 tae-r.2   123187772   trafficking protein particle complex subunit 3 
 hvu-r.1   123425061   trafficking protein particle complex subunit 3 
 sbi-r.1   8082565   trafficking protein particle complex subunit 3 
 bdi-r.1   100843330   trafficking protein particle complex subunit 3 
 cre-r.1   CHLRE_03g145607v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G54750 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G54750 (ath-m.4.bio coexpression data)

CoexMap"835565"


athAT5G54750 | Entrez gene ID : 835565      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 2 2 2 3 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISS  
GO:0005622 [list] [network] intracellular anatomical structure  (21227 genes)  ISS  
GO MF
Protein NP_001190539.1 [sequence] [blastp]
NP_200286.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  extr 1,  cysk 1,  nucl_plas 1  (predict for NP_001190539.1)
cyto 6,  chlo 1,  pero 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_200286.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001190539.1)
other 6  (predict for NP_200286.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT5G54750
ath-u.5
for
AT5G54750
ath-r.7
for
AT5G54750
ath-m.9
for
AT5G54750
ath-e.2
for
AT5G54750
ath-m.4.hor
for
AT5G54750
ath-m.4.lig
for
AT5G54750
ath-m.4.str
for
AT5G54750
ath-m.4.tis
for
AT5G54750
bra-r.6
for
103839271
bna-r.1
for
106402445
bna-r.1
for
106447069
ghi-r.1
for
107891361
ghi-r.1
for
107890090
cit-r.1
for
102628230
gma-u.5
for
100499843
gma-u.5
for
100306217
vvi-u.5
for
100241885
ppo-u.5
for
18095911
mtr-u.5
for
25500697
mtr-u.5
for
11441351
sly-u.5
for
101243746
sly-u.5
for
101243742
sot-r.1
for
102586597
sot-r.1
for
102585954
nta-r.1
for
107829374
nta-r.1
for
107803357
nta-r.1
for
107803314
osa-u.5
for
4333064
osa-u.5
for
4344075
zma-u.5
for
100285232
zma-u.5
for
100193521
tae-r.2
for
123044012
tae-r.2
for
123051889
tae-r.2
for
123187772
hvu-r.1
for
123425061
sbi-r.1
for
8082565
bdi-r.1
for
100843330
cre-r.1
for
CHLRE_03g145607v5


Ortholog ID: 6999
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT5G54750 LOC103839271 LOC106402445 LOC106447069 LOC107891361 LOC107890090 LOC102628230 LOC100499843 LOC100306217 LOC100241885 LOC18095911 LOC25500697 LOC11441351 LOC101243746 LOC101243742 LOC102586597 LOC102585954 LOC107829374 LOC107803357 LOC107803314 LOC4333064 LOC4344075 LOC100285232 LOC100193521 LOC123044012 LOC123051889 LOC123187772 LOC123425061 LOC8082565 LOC100843330 CHLRE_03g145607v5
Function* Transport protein particle (TRAPP) component trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 uncharacterized LOC102628230 uncharacterized LOC100499843 trafficking protein particle complex subunit 3-like uncharacterized LOC100241885 uncharacterized LOC18095911 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 uncharacterized LOC101243746 trafficking protein particle complex subunit 3-like trafficking protein particle complex subunit 3-like trafficking protein particle complex subunit 3-like uncharacterized LOC107829374 uncharacterized LOC107803357 uncharacterized LOC107803314 uncharacterized LOC4333064 uncharacterized LOC4344075 trafficking protein particle complex subunit 3 uncharacterized LOC100193521 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 trafficking protein particle complex subunit 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 4
bra00190 Oxidative phosphorylation 3
bra03050 Proteasome 3
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
bna04016 MAPK signaling pathway - plant 2
bna04070 Phosphatidylinositol signaling system 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04130 SNARE interactions in vesicular transport 2
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00190 Oxidative phosphorylation 3
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
sly03050 Proteasome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00190 Oxidative phosphorylation 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae04016 MAPK signaling pathway - plant 2
tae04070 Phosphatidylinositol signaling system 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00100 Steroid biosynthesis 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04070 Phosphatidylinositol signaling system 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03013 Nucleocytoplasmic transport 4
cre03018 RNA degradation 3
cre03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835565 103839271 106402445 106447069 107891361 107890090 102628230 100499843 100306217 100241885 18095911 25500697 11441351 101243746 101243742 102586597 102585954 107829374 107803357 107803314 4333064 4344075 100285232 100193521 123044012 123051889 123187772 123425061 8082565 100843330 5721254
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