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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-u.5   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-r.7   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-m.9   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-e.2   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-m.4.hor   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-m.4.lig   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-m.4.str   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-m.4.tis   AT1G10490   GNAT acetyltransferase (DUF699) 
 ath-u.5   AT3G57940   GNAT acetyltransferase (DUF699) 
 bra-r.6   103868091   RNA cytidine acetyltransferase 1 
 bra-r.6   103841691   RNA cytidine acetyltransferase 2 
 bna-r.1   106453097   RNA cytidine acetyltransferase 1 
 bna-r.1   106377323   RNA cytidine acetyltransferase 2 
 bna-r.1   106362417   RNA cytidine acetyltransferase 1 
 ghi-r.1   107945510   RNA cytidine acetyltransferase 1 
 ghi-r.1   107926365   RNA cytidine acetyltransferase 1 
 cit-r.1   102624913   RNA cytidine acetyltransferase 1-like 
 gma-u.5   100812924   RNA cytidine acetyltransferase 1 
 gma-u.5   100788187   RNA cytidine acetyltransferase 1 
 vvi-u.5   100259524   RNA cytidine acetyltransferase 1 
 ppo-u.5   7477135   RNA cytidine acetyltransferase 2 
 ppo-u.5   7456272   RNA cytidine acetyltransferase 1 
 mtr-u.5   11439952   RNA cytidine acetyltransferase 1 
 sly-u.5   101258943   RNA cytidine acetyltransferase 2-like 
 sot-r.1   102594215   UPF0202 protein At1g10490-like 
 nta-r.1   107821045   RNA cytidine acetyltransferase 1 
 nta-r.1   107820382   RNA cytidine acetyltransferase 1 
 osa-u.5   4351627   RNA cytidine acetyltransferase 1 
 zma-u.5   109941429   RNA cytidine acetyltransferase 1 
 tae-r.2   123093134   RNA cytidine acetyltransferase 1 
 tae-r.2   123084960   RNA cytidine acetyltransferase 1 
 tae-r.2   123098409   RNA cytidine acetyltransferase 1 
 hvu-r.1   123449440   RNA cytidine acetyltransferase 1-like 
 sbi-r.1   8083812   RNA cytidine acetyltransferase 1 
 bdi-r.1   100834315   RNA cytidine acetyltransferase 1 
 cre-r.1   CHLRE_03g192850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G10490 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G10490 (ath-m.4.bio coexpression data)

CoexMap"837589"


athAT1G10490 | Entrez gene ID : 837589      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0106162 [list] [network] mRNA N-acetyltransferase activity  (2 genes)  IGI  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IDA  
Protein NP_001318971.1 [sequence] [blastp]
NP_172519.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001318971.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_172519.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001318971.1)
other 6,  mito 3  (predict for NP_172519.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT1G10490
ath-u.5
for
AT1G10490
ath-r.7
for
AT1G10490
ath-m.9
for
AT1G10490
ath-e.2
for
AT1G10490
ath-m.4.hor
for
AT1G10490
ath-m.4.lig
for
AT1G10490
ath-m.4.str
for
AT1G10490
ath-m.4.tis
for
AT1G10490
ath-u.5
for
AT3G57940
bra-r.6
for
103868091
bra-r.6
for
103841691
bna-r.1
for
106453097
bna-r.1
for
106377323
bna-r.1
for
106362417
ghi-r.1
for
107945510
ghi-r.1
for
107926365
cit-r.1
for
102624913
gma-u.5
for
100812924
gma-u.5
for
100788187
vvi-u.5
for
100259524
ppo-u.5
for
7477135
ppo-u.5
for
7456272
mtr-u.5
for
11439952
sly-u.5
for
101258943
sot-r.1
for
102594215
nta-r.1
for
107821045
nta-r.1
for
107820382
osa-u.5
for
4351627
zma-u.5
for
109941429
tae-r.2
for
123093134
tae-r.2
for
123084960
tae-r.2
for
123098409
hvu-r.1
for
123449440
sbi-r.1
for
8083812
bdi-r.1
for
100834315
cre-r.1
for
CHLRE_03g192850v5


Ortholog ID: 7629
Species ath ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT1G10490 AT3G57940 LOC103868091 LOC103841691 LOC106453097 LOC106377323 LOC106362417 LOC107945510 LOC107926365 LOC102624913 LOC100812924 LOC100788187 LOC100259524 LOC7477135 LOC7456272 LOC11439952 LOC101258943 LOC102594215 LOC107821045 LOC107820382 LOC4351627 LOC109941429 LOC123093134 LOC123084960 LOC123098409 LOC123449440 LOC8083812 LOC100834315 CHLRE_03g192850v5
Function* GNAT acetyltransferase (DUF699) GNAT acetyltransferase (DUF699) RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1-like RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2-like UPF0202 protein At1g10490-like RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1-like RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03013 Nucleocytoplasmic transport 3
zma03030 DNA replication 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837589 824963 103868091 103841691 106453097 106377323 106362417 107945510 107926365 102624913 100812924 100788187 100259524 7477135 7456272 11439952 101258943 102594215 107821045 107820382 4351627 109941429 123093134 123084960 123098409 123449440 8083812 100834315 5718691
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