ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.bio	AT1G23710	hypothetical protein (DUF1645)
ath-u.5	AT1G23710	hypothetical protein (DUF1645)
ath-r.7	AT1G23710	hypothetical protein (DUF1645)
ath-m.9	AT1G23710	hypothetical protein (DUF1645)
ath-e.2	AT1G23710	hypothetical protein (DUF1645)
ath-m.4.hor	AT1G23710	hypothetical protein (DUF1645)
ath-m.4.lig	AT1G23710	hypothetical protein (DUF1645)
ath-m.4.str	AT1G23710	hypothetical protein (DUF1645)
ath-m.4.tis	AT1G23710	hypothetical protein (DUF1645)
ath-u.5	AT3G27880	hypothetical protein (DUF1645)
ath-u.5	AT5G62770	membrane-associated kinase regulator, putative (DUF1645)
ath-u.5	AT1G70420	DNA ligase-like protein, putative (DUF1645)
bra-r.6	103863978	uncharacterized LOC103863978
bra-r.6	103831573	uncharacterized LOC103831573
bra-r.6	103837426	uncharacterized LOC103837426
bna-r.1	111208264	uncharacterized LOC111208264
bna-r.1	106406488	uncharacterized LOC106406488
bna-r.1	106349226	uncharacterized LOC106349226
ghi-r.1	107887693	histone H3.v1
ghi-r.1	107898668	uncharacterized LOC107898668
ghi-r.1	107926473	uncharacterized LOC107926473
cit-r.1	102619209	uncharacterized LOC102619209
cit-r.1	102616997	uncharacterized LOC102616997
cit-r.1	102615666	uncharacterized LOC102615666
gma-u.5	100776669	uncharacterized LOC100776669
gma-u.5	100805151	protein bfr2
gma-u.5	100806294	uncharacterized LOC100806294
vvi-u.5	100254241	uncharacterized LOC100254241
vvi-u.5	100243388	uncharacterized LOC100243388
vvi-u.5	100852726	uncharacterized LOC100852726
ppo-u.5	18105834	uncharacterized LOC18105834
ppo-u.5	18103781	uncharacterized LOC18103781
mtr-u.5	11435651	uncharacterized LOC11435651
mtr-u.5	11406346	uncharacterized LOC11406346
mtr-u.5	25493766	uncharacterized LOC25493766
sly-u.5	101245934	uncharacterized LOC101245934
sly-u.5	101250946	uncharacterized LOC101250946
sly-u.5	101248673	uncharacterized LOC101248673
sot-r.1	107062317	uncharacterized LOC107062317
sot-r.1	102587306	uncharacterized LOC102587306
sot-r.1	102604349	uncharacterized LOC102604349
nta-r.1	107781308	uncharacterized LOC107781308
nta-r.1	107800218	uncharacterized LOC107800218
nta-r.1	107813864	uncharacterized LOC107813864
osa-u.5	4339649	uncharacterized LOC4339649
osa-u.5	4339706	uncharacterized LOC4339706
osa-u.5	4339650	uncharacterized LOC4339650
zma-u.5	100277384	DUF1645 family protein
zma-u.5	100277000	uncharacterized LOC100277000
zma-u.5	100276388	uncharacterized LOC100276388
tae-r.2	123182281	uncharacterized LOC123182281
tae-r.2	123181961	uncharacterized LOC123181961
tae-r.2	123181952	zinc finger protein AEBP2
hvu-r.1	123440064	uncharacterized LOC123440064
hvu-r.1	123420122	uncharacterized LOC123420122
hvu-r.1	123420098	uncharacterized LOC123420098
sbi-r.1	8064719	uncharacterized LOC8064719
sbi-r.1	8058219	uncharacterized LOC8058219
sbi-r.1	8061813	uncharacterized LOC8061813
bdi-r.1	100825091	uncharacterized LOC100825091
bdi-r.1	100822431	uncharacterized LOC100822431
bdi-r.1	100846091	uncharacterized LOC100846091

Top 50 coexpressed genes to AT1G23710 (ath-m.4.bio coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G23710 (ath-m.4.bio coexpression data)

CoexMap"838981"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0071456 [list] [network] cellular response to hypoxia

(241 genes)

HEP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_564201.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_564201.1)

Subcellular
localization
TargetP

other 7

(predict for NP_564201.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.bio for AT1G23710	ath-u.5 for AT1G23710	ath-r.7 for AT1G23710	ath-m.9 for AT1G23710	ath-e.2 for AT1G23710	ath-m.4.hor for AT1G23710	ath-m.4.lig for AT1G23710	ath-m.4.str for AT1G23710	ath-m.4.tis for AT1G23710	ath-u.5 for AT3G27880	ath-u.5 for AT5G62770	ath-u.5 for AT1G70420	bra-r.6 for 103863978	bra-r.6 for 103831573	bra-r.6 for 103837426	bna-r.1 for 111208264	bna-r.1 for 106406488	bna-r.1 for 106349226	ghi-r.1 for 107887693	ghi-r.1 for 107898668	ghi-r.1 for 107926473	cit-r.1 for 102619209	cit-r.1 for 102616997	cit-r.1 for 102615666	gma-u.5 for 100776669	gma-u.5 for 100805151	gma-u.5 for 100806294	vvi-u.5 for 100254241	vvi-u.5 for 100243388	vvi-u.5 for 100852726	ppo-u.5 for 18105834	ppo-u.5 for 18103781	mtr-u.5 for 11435651	mtr-u.5 for 11406346	mtr-u.5 for 25493766	sly-u.5 for 101245934	sly-u.5 for 101250946	sly-u.5 for 101248673	sot-r.1 for 107062317	sot-r.1 for 102587306	sot-r.1 for 102604349	nta-r.1 for 107781308	nta-r.1 for 107800218	nta-r.1 for 107813864	osa-u.5 for 4339649	osa-u.5 for 4339706	osa-u.5 for 4339650	zma-u.5 for 100277384	zma-u.5 for 100277000	zma-u.5 for 100276388	tae-r.2 for 123182281	tae-r.2 for 123181961	tae-r.2 for 123181952	hvu-r.1 for 123440064	hvu-r.1 for 123420122	hvu-r.1 for 123420098	sbi-r.1 for 8064719	sbi-r.1 for 8058219	sbi-r.1 for 8061813	bdi-r.1 for 100825091	bdi-r.1 for 100822431	bdi-r.1 for 100846091

Ortholog

Ortholog ID: 538

Species

ath

bra

bna

ghi

cit

gma

vvi

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

hypothetical protein (DUF1645)

membrane-associated kinase regulator, putative (DUF1645)

DNA ligase-like protein, putative (DUF1645)

uncharacterized LOC103831573

uncharacterized LOC103875183

uncharacterized LOC103852649

uncharacterized BNAC09G50940D

uncharacterized LOC106417664

uncharacterized LOC106394669

histone H3.v1

uncharacterized LOC107898668

uncharacterized LOC107914275

uncharacterized LOC102619209

uncharacterized LOC102616997

uncharacterized LOC102615666

protein bfr2

uncharacterized LOC102660396

uncharacterized LOC100789513

uncharacterized LOC100254241

uncharacterized LOC100243388

uncharacterized LOC100852726

uncharacterized LOC11435651

uncharacterized LOC11406346

uncharacterized LOC25493766

uncharacterized LOC101250946

uncharacterized LOC104648036

uncharacterized LOC107062317

uncharacterized LOC102594108

uncharacterized LOC102592047

uncharacterized LOC107819520

uncharacterized LOC107829043

uncharacterized LOC107832089

uncharacterized LOC4327853

uncharacterized LOC4326582

DUF1645 family protein

uncharacterized LOC100277000

DUF1645 family protein

uncharacterized LOC123074567

uncharacterized LOC123074600

uncharacterized LOC123099458

uncharacterized LOC123440064

uncharacterized LOC123420586

uncharacterized LOC123440016

uncharacterized LOC8058219

uncharacterized LOC8061813

uncharacterized LOC8064690

uncharacterized LOC100825091

uncharacterized LOC100846091

zinc finger protein AEBP2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	12
bna04626	Plant-pathogen interaction	12
bna04016	MAPK signaling pathway - plant	8
bna04070	Phosphatidylinositol signaling system	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	4
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr04626	Plant-pathogen interaction	5
mtr03040	Spliceosome	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot01240	Biosynthesis of cofactors	3
sot01250	Biosynthesis of nucleotide sugars	3
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	4
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7
zma04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	7
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	4
hvu00270	Cysteine and methionine metabolism	3
hvu01230	Biosynthesis of amino acids	3
hvu01240	Biosynthesis of cofactors	3
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00910	Nitrogen metabolism	4
sbi01310	Nitrogen cycle	4
sbi00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	6
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

838981

836398

843378

103831573

103875183

103852649

106401598

106417664

106394669

107887693

107898668

107914275

102619209

102616997

102615666

100805151

102660396

100789513

100254241

100243388

100852726

11435651

11406346

25493766

101250946

104648036

107062317

102594108

102592047

107819520

107829043

107832089

4327853

4326582

100277384

100277000

103636118

123074567

123074600

123099458

123440064

123420586

123440016

8058219

8061813

8064690

100825091

100846091

100825398

The preparation time of this page was 0.5 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	3	3	3	3	3	2	3	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G23710 (ath-m.4.bio coexpression data)

Top 50 enrichment test to AT1G23710 (ath-m.4.bio coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**