ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102604349	uncharacterized LOC102604349
sot-r.1	102587306	uncharacterized LOC102587306
sot-r.1	102594108	uncharacterized LOC102594108
sot-r.1	102596863	uncharacterized LOC102596863
sly-u.5	101250946	uncharacterized LOC101250946
sly-u.5	101248673	uncharacterized LOC101248673
nta-r.1	107822987	uncharacterized LOC107822987
nta-r.1	107770697	uncharacterized LOC107770697
nta-r.1	107779017	uncharacterized LOC107779017
ath-u.5	AT3G27880	hypothetical protein (DUF1645)
ath-u.5	AT5G62770	membrane-associated kinase regulator, putative (DUF1645)
ath-u.5	AT1G23710	hypothetical protein (DUF1645)
gma-u.5	102660523	uncharacterized LOC102660523
gma-u.5	102660396	uncharacterized LOC102660396
bra-r.6	103874720	uncharacterized LOC103874720
bra-r.6	103831573	uncharacterized LOC103831573
bra-r.6	103837426	uncharacterized LOC103837426
vvi-u.5	100254241	uncharacterized LOC100254241
vvi-u.5	100243388	uncharacterized LOC100243388
vvi-u.5	100852726	uncharacterized LOC100852726
ppo-u.5	18103781	uncharacterized LOC18103781
ppo-u.5	18105834	uncharacterized LOC18105834
mtr-u.5	25493766	uncharacterized LOC25493766
mtr-u.5	11406346	uncharacterized LOC11406346
mtr-u.5	11435651	uncharacterized LOC11435651
ghi-r.1	121231867	uncharacterized LOC121231867
ghi-r.1	107933337	uncharacterized LOC107933337
ghi-r.1	107926473	uncharacterized LOC107926473
bna-r.1	106401999	uncharacterized LOC106401999
bna-r.1	106364114	uncharacterized LOC106364114
bna-r.1	106424653	uncharacterized LOC106424653
cit-r.1	102616997	uncharacterized LOC102616997
cit-r.1	102615666	uncharacterized LOC102615666
cit-r.1	102619209	uncharacterized LOC102619209
osa-u.5	4339650	uncharacterized LOC4339650
osa-u.5	4339706	uncharacterized LOC4339706
zma-u.5	103636118	DUF1645 family protein
zma-u.5	100276388	uncharacterized LOC100276388
zma-u.5	111589541	uncharacterized LOC111589541
tae-r.2	123099992	uncharacterized LOC123099992
tae-r.2	123181961	uncharacterized LOC123181961
tae-r.2	123181952	zinc finger protein AEBP2
hvu-r.1	123440064	uncharacterized LOC123440064
hvu-r.1	123420122	uncharacterized LOC123420122
hvu-r.1	123420098	uncharacterized LOC123420098
sbi-r.1	8061813	uncharacterized LOC8061813
sbi-r.1	8064690	uncharacterized LOC8064690
sbi-r.1	8058219	uncharacterized LOC8058219
bdi-r.1	100822431	uncharacterized LOC100822431
bdi-r.1	100846091	uncharacterized LOC100846091
bdi-r.1	100822333	uncharacterized LOC100822333

Top 50 coexpressed genes to 102604349 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102604349 (sot-r.1 coexpression data)

CoexMap"102604349"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006341323.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, mito 1, chlo 1, cyto_mito 1, golg_plas 1

(predict for XP_006341323.1)

Subcellular
localization
TargetP

other 7

(predict for XP_006341323.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102604349	sot-r.1 for 102587306	sot-r.1 for 102594108	sot-r.1 for 102596863	sly-u.5 for 101250946	sly-u.5 for 101248673	nta-r.1 for 107822987	nta-r.1 for 107770697	nta-r.1 for 107779017	ath-u.5 for AT3G27880	ath-u.5 for AT5G62770	ath-u.5 for AT1G23710	gma-u.5 for 102660523	gma-u.5 for 102660396	bra-r.6 for 103874720	bra-r.6 for 103831573	bra-r.6 for 103837426	vvi-u.5 for 100254241	vvi-u.5 for 100243388	vvi-u.5 for 100852726	ppo-u.5 for 18103781	ppo-u.5 for 18105834	mtr-u.5 for 25493766	mtr-u.5 for 11406346	mtr-u.5 for 11435651	ghi-r.1 for 121231867	ghi-r.1 for 107933337	ghi-r.1 for 107926473	bna-r.1 for 106401999	bna-r.1 for 106364114	bna-r.1 for 106424653	cit-r.1 for 102616997	cit-r.1 for 102615666	cit-r.1 for 102619209	osa-u.5 for 4339650	osa-u.5 for 4339706	zma-u.5 for 103636118	zma-u.5 for 100276388	zma-u.5 for 111589541	tae-r.2 for 123099992	tae-r.2 for 123181961	tae-r.2 for 123181952	hvu-r.1 for 123440064	hvu-r.1 for 123420122	hvu-r.1 for 123420098	sbi-r.1 for 8061813	sbi-r.1 for 8064690	sbi-r.1 for 8058219	bdi-r.1 for 100822431	bdi-r.1 for 100846091	bdi-r.1 for 100822333

Ortholog

Ortholog ID: 538

Species

sot

sly

nta

ath

gma

bra

vvi

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102594108

uncharacterized LOC107062317

uncharacterized LOC102592047

uncharacterized LOC101250946

uncharacterized LOC104648036

uncharacterized LOC107819520

uncharacterized LOC107829043

uncharacterized LOC107832089

membrane-associated kinase regulator, putative (DUF1645)

hypothetical protein (DUF1645)

DNA ligase-like protein, putative (DUF1645)

uncharacterized LOC102660396

protein bfr2

uncharacterized LOC100789513

uncharacterized LOC103831573

uncharacterized LOC103852649

uncharacterized LOC103875183

uncharacterized LOC100254241

uncharacterized LOC100243388

uncharacterized LOC100852726

uncharacterized LOC25493766

uncharacterized LOC11406346

uncharacterized LOC11435651

uncharacterized LOC107914275

uncharacterized LOC107898668

histone H3.v1

uncharacterized LOC106417664

uncharacterized LOC106394669

uncharacterized BNAC09G50940D

uncharacterized LOC102616997

uncharacterized LOC102615666

uncharacterized LOC102619209

uncharacterized LOC4327853

uncharacterized LOC4326582

DUF1645 family protein

uncharacterized LOC100277000

DUF1645 family protein

uncharacterized LOC123074600

uncharacterized LOC123074567

uncharacterized LOC123099458

uncharacterized LOC123440064

uncharacterized LOC123420586

uncharacterized LOC123440016

uncharacterized LOC8061813

uncharacterized LOC8064690

uncharacterized LOC8058219

uncharacterized LOC100846091

zinc finger protein AEBP2

uncharacterized LOC100825091

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot01240	Biosynthesis of cofactors	3
sot01250	Biosynthesis of nucleotide sugars	3
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr04626	Plant-pathogen interaction	5
mtr03040	Spliceosome	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	4
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	12
bna04626	Plant-pathogen interaction	12
bna04016	MAPK signaling pathway - plant	8
bna04070	Phosphatidylinositol signaling system	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7
zma04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	4
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	7
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	4
hvu00270	Cysteine and methionine metabolism	3
hvu01230	Biosynthesis of amino acids	3
hvu01240	Biosynthesis of cofactors	3
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00910	Nitrogen metabolism	4
sbi01310	Nitrogen cycle	4
sbi00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	6
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

102594108

107062317

102592047

101250946

104648036

107819520

107829043

107832089

836398

838981

843378

102660396

100805151

100789513

103831573

103852649

103875183

100254241

100243388

100852726

25493766

11406346

11435651

107914275

107898668

107887693

106417664

106394669

106401598

102616997

102615666

102619209

4327853

4326582

103636118

100277000

100277384

123074600

123074567

123099458

123440064

123420586

123440016

8061813

8064690

8058219

100846091

100825398

100825091

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Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	2	3	3	2	3	3	3	3	2	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102604349 (sot-r.1 coexpression data)

Top 50 enrichment test to 102604349 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**