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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio  FRL2  FRIGIDA like 2 
 ath-u.5  FRL2  FRIGIDA like 2 
 ath-r.7  FRL2  FRIGIDA like 2 
 ath-m.9  FRL2  FRIGIDA like 2 
 ath-e.2  FRL2  FRIGIDA like 2 
 ath-m.4.hor  FRL2  FRIGIDA like 2 
 ath-m.4.lig  FRL2  FRIGIDA like 2 
 ath-m.4.str  FRL2  FRIGIDA like 2 
 ath-m.4.tis  FRL2  FRIGIDA like 2 
 ath-u.5  FRL1  FRIGIDA like 1 
 bra-r.6  103846334  truncated FRIGIDA-like protein 1 
 bra-r.6  103840219  FRIGIDA-like protein 2 
 bna-r.1  111211832  FRIGIDA-like protein 2 
 bna-r.1  106372212  truncated FRIGIDA-like protein 1 
 bna-r.1  106367158  FRIGIDA-like protein 2 
 ghi-r.1  121212478  FRIGIDA-like protein 1 
 ghi-r.1  121212477  FRIGIDA-like protein 1 
 ghi-r.1  107920541  FRIGIDA-like protein 1 
 cit-r.1  102623427  truncated FRIGIDA-like protein 1 
 gma-u.5  102669439  FRIGIDA-like protein 1 
 gma-u.5  100818664  FRIGIDA-like protein 1 
 gma-u.5  100808558  truncated FRIGIDA-like protein 1 
 vvi-u.5  100262244  truncated FRIGIDA-like protein 1 
 vvi-u.5  104882370  FRIGIDA-like protein 2 
 vvi-u.5  104877608  truncated FRIGIDA-like protein 1 
 ppo-u.5  7478833  truncated FRIGIDA-like protein 1 
 mtr-u.5  11423505  FRIGIDA-like protein 1 
 mtr-u.5  11430895  truncated FRIGIDA-like protein 1 

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Top 50 coexpressed genes to FRL2 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FRL2 (ath-m.4.bio coexpression data)

CoexMap"840070"


athFRL2 | Entrez gene ID : 840070
Species ath bra bna ghi cit gma vvi ppo mtr sbi cre tae sly zma osa sot bdi nta hvu
Paralog 10 2 3 3 1 3 3 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO CC
GO MF
Protein NP_174463.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  extr 1,  pero 1,  cysk 1,  golg 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_174463.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for NP_174463.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
FRL2


ath-u.5
for
FRL2


ath-r.7
for
FRL2


ath-m.9
for
FRL2


ath-e.2
for
FRL2


ath-m.4.hor
for
FRL2


ath-m.4.lig
for
FRL2


ath-m.4.str
for
FRL2


ath-m.4.tis
for
FRL2


ath-u.5
for
FRL1


bra-r.6
for
103846334


bra-r.6
for
103840219


bna-r.1
for
111211832


bna-r.1
for
106372212


bna-r.1
for
106367158


ghi-r.1
for
121212478


ghi-r.1
for
121212477


ghi-r.1
for
107920541


cit-r.1
for
102623427


gma-u.5
for
102669439


gma-u.5
for
100818664


gma-u.5
for
100808558


vvi-u.5
for
100262244


vvi-u.5
for
104882370


vvi-u.5
for
104877608


ppo-u.5
for
7478833


mtr-u.5
for
11423505


mtr-u.5
for
11430895



Ortholog ID: 12001
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi vvi ppo mtr mtr
Symbol FRL2 FRL1 LOC103846334 LOC103840219 LOC111211832 LOC106372212 LOC125579026 LOC121212478 LOC121212477 LOC107920541 LOC102623427 LOC102669439 LOC100818664 LOC100808558 LOC100262244 LOC104882370 LOC104877608 LOC7478833 LOC11423505 LOC11430895
Function* FRIGIDA like 2 FRIGIDA like 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 2 FRIGIDA-like protein 2 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 1 FRIGIDA-like protein 1 FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 1 FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 2 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03083 Polycomb repressive complex 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03083 Polycomb repressive complex 3
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840070 831493 103846334 103840219 111211832 106372212 125579026 121212478 121212477 107920541 102623427 102669439 100818664 100808558 100262244 104882370 104877608 7478833 11423505 11430895
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