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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121212477   FRIGIDA-like protein 1 
 ghi-r.1   121212478   FRIGIDA-like protein 1 
 ghi-r.1   107920541   FRIGIDA-like protein 1 
 ath-u.5   FRL1   FRIGIDA like 1 
 ath-u.5   FRL2   FRIGIDA like 2 
 bra-r.6   103846334   truncated FRIGIDA-like protein 1 
 bra-r.6   103840219   FRIGIDA-like protein 2 
 bna-r.1   111211832   FRIGIDA-like protein 2 
 bna-r.1   106372212   truncated FRIGIDA-like protein 1 
 bna-r.1   106367158   FRIGIDA-like protein 2 
 cit-r.1   102623427   truncated FRIGIDA-like protein 1 
 gma-u.5   102669439   FRIGIDA-like protein 1 
 gma-u.5   100818664   FRIGIDA-like protein 1 
 gma-u.5   100808558   truncated FRIGIDA-like protein 1 
 vvi-u.5   100262244   truncated FRIGIDA-like protein 1 
 vvi-u.5   104882370   FRIGIDA-like protein 2 
 vvi-u.5   104877608   truncated FRIGIDA-like protein 1 
 ppo-u.5   7478833   truncated FRIGIDA-like protein 1 
 mtr-u.5   11423505   FRIGIDA-like protein 1 
 mtr-u.5   11430895   truncated FRIGIDA-like protein 1 

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Top 50 coexpressed genes to 121212477 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121212477 (ghi-r.1 coexpression data)

CoexMap"121212477"


ghiLOC121212477 | Entrez gene ID : 121212477    
Species ghi ath bra bna cit gma vvi ppo mtr sot bdi sly nta osa tae zma cre sbi hvu
Paralog 3 2 2 3 1 3 3 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_040941206.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  cysk 1  (predict for XP_040941206.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_040941206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121212477
ghi-r.1
for
121212478
ghi-r.1
for
107920541
ath-u.5
for
FRL1
ath-u.5
for
FRL2
bra-r.6
for
103846334
bra-r.6
for
103840219
bna-r.1
for
111211832
bna-r.1
for
106372212
bna-r.1
for
106367158
cit-r.1
for
102623427
gma-u.5
for
102669439
gma-u.5
for
100818664
gma-u.5
for
100808558
vvi-u.5
for
100262244
vvi-u.5
for
104882370
vvi-u.5
for
104877608
ppo-u.5
for
7478833
mtr-u.5
for
11423505
mtr-u.5
for
11430895


Ortholog ID: 12001
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma gma vvi vvi vvi ppo mtr mtr
Symbol LOC121212477 LOC121212478 LOC107920541 FRL1 FRL2 LOC103846334 LOC103840219 LOC111211832 LOC106372212 LOC125579026 LOC102623427 LOC102669439 LOC100818664 LOC100808558 LOC100262244 LOC104882370 LOC104877608 LOC7478833 LOC11423505 LOC11430895
Function* FRIGIDA-like protein 1 FRIGIDA-like protein 1 FRIGIDA-like protein 1 FRIGIDA like 1 FRIGIDA like 2 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 2 FRIGIDA-like protein 2 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 1 FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 2 truncated FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1 FRIGIDA-like protein 1 truncated FRIGIDA-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03083 Polycomb repressive complex 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03083 Polycomb repressive complex 3
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121212477 121212478 107920541 831493 840070 103846334 103840219 111211832 106372212 125579026 102623427 102669439 100818664 100808558 100262244 104882370 104877608 7478833 11423505 11430895
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