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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-u.5   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-r.7   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-m.9   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-e.2   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-m.4.hor   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-m.4.lig   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-m.4.str   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-m.4.tis   CYCA3;2   cyclin-dependent protein kinase 3;2 
 ath-u.5   CYCA3;1   Cyclin A3;1 
 bra-r.6   103827996   putative cyclin-A3-1 
 bra-r.6   103868712   cyclin-A3-2 
 bra-r.6   103849583   cyclin-A3-2 
 bna-r.1   106357845   cyclin-A3-2-like 
 bna-r.1   111208815   cyclin-A3-4-like 
 bna-r.1   106352487   putative cyclin-A3-1 
 ghi-r.1   107905616   putative cyclin-A3-1 
 ghi-r.1   107943583   putative cyclin-A3-1 
 ghi-r.1   107938357   cyclin-A3-1 
 cit-r.1   102621044   putative cyclin-A3-1 
 cit-r.1   102611949   putative cyclin-A3-1 
 vvi-u.5   100250548   putative cyclin-A3-1 
 ppo-u.5   18104821   putative cyclin-A3-1 
 mtr-u.5   25489918   putative cyclin-A3-1 
 mtr-u.5   25489921   putative cyclin-A3-1 
 sly-u.5   101267520   putative cyclin-A3-1 
 sly-u.5   101258929   G2/mitotic-specific cyclin C13-1-like 
 sly-u.5   101258635   putative cyclin-A3-1 
 sot-r.1   102585677   putative cyclin-A3-1 
 sot-r.1   102580144   putative cyclin-A3-1 
 nta-r.1   107827595   G2/mitotic-specific cyclin C13-1-like 
 nta-r.1   107788519   putative cyclin-A3-1 
 nta-r.1   107795100   putative cyclin-A3-1 
 osa-u.5   4333422   cyclin-A3-1 
 osa-u.5   4352642   cyclin-A3-2-like 
 zma-u.5   100280138   uncharacterized LOC100280138 
 zma-u.5   100280674   cyclin-A2 
 zma-u.5   103650257   cyclin-A3-2-like 
 tae-r.2   123119622   cyclin-A3-2 
 tae-r.2   123102420   cyclin-A3-2 
 hvu-r.1   123395514   cyclin-A3-2-like 
 hvu-r.1   123447783   cyclin-A3-1-like 
 sbi-r.1   8064509   cyclin-A3-1 
 sbi-r.1   8074274   cyclin-A3-2 
 bdi-r.1   100834254   cyclin-A3-2 
 bdi-r.1   100833039   cyclin-A3-1 
 bdi-r.1   100845231   cyclin-A3-2 

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Top 50 coexpressed genes to CYCA3;2 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CYCA3;2 (ath-m.4.bio coexpression data)

CoexMap"841124"


athCYCA3;2 | Entrez gene ID : 841124      
Species ath bra bna ghi cit vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi gma cre
Paralog 10 3 3 3 2 1 1 2 3 2 3 2 3 2 2 2 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
Protein NP_564499.3 [sequence] [blastp]
NP_564500.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  chlo 2,  E.R._plas 2,  cyto_E.R. 2,  nucl 1  (predict for NP_564499.3)
chlo 3,  cyto 3,  nucl 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_564500.1)
Subcellular
localization
TargetP
other 7  (predict for NP_564499.3)
other 7  (predict for NP_564500.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
CYCA3;2
ath-u.5
for
CYCA3;2
ath-r.7
for
CYCA3;2
ath-m.9
for
CYCA3;2
ath-e.2
for
CYCA3;2
ath-m.4.hor
for
CYCA3;2
ath-m.4.lig
for
CYCA3;2
ath-m.4.str
for
CYCA3;2
ath-m.4.tis
for
CYCA3;2
ath-u.5
for
CYCA3;1
bra-r.6
for
103827996
bra-r.6
for
103868712
bra-r.6
for
103849583
bna-r.1
for
106357845
bna-r.1
for
111208815
bna-r.1
for
106352487
ghi-r.1
for
107905616
ghi-r.1
for
107943583
ghi-r.1
for
107938357
cit-r.1
for
102621044
cit-r.1
for
102611949
vvi-u.5
for
100250548
ppo-u.5
for
18104821
mtr-u.5
for
25489918
mtr-u.5
for
25489921
sly-u.5
for
101267520
sly-u.5
for
101258929
sly-u.5
for
101258635
sot-r.1
for
102585677
sot-r.1
for
102580144
nta-r.1
for
107827595
nta-r.1
for
107788519
nta-r.1
for
107795100
osa-u.5
for
4333422
osa-u.5
for
4352642
zma-u.5
for
100280138
zma-u.5
for
100280674
zma-u.5
for
103650257
tae-r.2
for
123119622
tae-r.2
for
123102420
hvu-r.1
for
123395514
hvu-r.1
for
123447783
sbi-r.1
for
8064509
sbi-r.1
for
8074274
bdi-r.1
for
100834254
bdi-r.1
for
100833039
bdi-r.1
for
100845231


Ortholog ID: 1000
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma vvi ppo mtr mtr sly sly sly sot sot nta nta nta osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi bdi
Symbol CYCA3;2 CYCA3;1 LOC103827996 LOC103868712 LOC103848253 LOC106357845 LOC106371865 LOC106426410 LOC107905616 LOC107938357 LOC107917057 LOC102621044 LOC102611949 LOC100793436 LOC100250548 LOC18104821 LOC25489921 LOC11413042 LOC101267520 LOC101255776 LOC101255181 LOC102585677 LOC102589578 LOC107827595 LOC107824914 LOC107804529 LOC4333422 LOC100280138 LOC100280674 LOC100216646 LOC123119622 LOC123096132 LOC123395514 LOC123447783 LOC8064509 LOC8074274 LOC100834254 LOC100833039 LOC100845231
Function* cyclin-dependent protein kinase 3;2 Cyclin A3;1 putative cyclin-A3-1 cyclin-A3-2 cyclin-A3-2 cyclin-A3-2-like cyclin-A3-4 cyclin-A3-2 putative cyclin-A3-1 cyclin-A3-1 cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 putative cyclin-A3-1 G2/mitotic-specific cyclin C13-1-like G2/mitotic-specific cyclin C13-1-like putative cyclin-A3-1 G2/mitotic-specific cyclin C13-1-like G2/mitotic-specific cyclin C13-1-like G2/mitotic-specific cyclin C13-1-like putative cyclin-A3-1 cyclin-A3-1 uncharacterized LOC100280138 cyclin-A2 cyclin superfamily protein, putative cyclin-A3-2 cyclin-A3-1 cyclin-A3-2-like cyclin-A3-1-like cyclin-A3-1 cyclin-A3-2 cyclin-A3-2 cyclin-A3-1 cyclin-A3-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03440 Homologous recombination 5
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 4
bra00240 Pyrimidine metabolism 3
bra01232 Nucleotide metabolism 3
bra00230 Purine metabolism 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00730 Thiamine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 8
ppo04814 Motor proteins 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03430 Mismatch repair 3
mtr03030 DNA replication 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00240 Pyrimidine metabolism 4
sly01232 Nucleotide metabolism 4
sly00230 Purine metabolism 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 7
sot03460 Fanconi anemia pathway 5
sot03440 Homologous recombination 4
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 5
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma00240 Pyrimidine metabolism 3
zma01232 Nucleotide metabolism 3
zma00230 Purine metabolism 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 6
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841124 834324 103827996 103868712 103848253 106357845 106371865 106426410 107905616 107938357 107917057 102621044 102611949 100793436 100250548 18104821 25489921 11413042 101267520 101255776 101255181 102585677 102589578 107827595 107824914 107804529 4333422 100280138 100280674 100216646 123119622 123096132 123395514 123447783 8064509 8074274 100834254 100833039 100845231
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