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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT1G53560   Ribosomal protein L18ae family 
 ath-u.5   AT1G53560   Ribosomal protein L18ae family 
 ath-r.7   AT1G53560   Ribosomal protein L18ae family 
 ath-m.9   AT1G53560   Ribosomal protein L18ae family 
 ath-e.2   AT1G53560   Ribosomal protein L18ae family 
 ath-m.4.hor   AT1G53560   Ribosomal protein L18ae family 
 ath-m.4.lig   AT1G53560   Ribosomal protein L18ae family 
 ath-m.4.str   AT1G53560   Ribosomal protein L18ae family 
 ath-m.4.tis   AT1G53560   Ribosomal protein L18ae family 
 ath-u.5   AT1G17080   Ribosomal protein L18ae family 
 bra-r.6   103871119   60S ribosomal protein L18a-like protein 
 bra-r.6   103835974   60S ribosomal protein L18a-like protein 
 bna-r.1   106434929   60S ribosomal protein L18a-like protein 
 bna-r.1   106345935   60S ribosomal protein L18a-like protein 
 bna-r.1   106387605   60S ribosomal protein L18a-like protein 
 ghi-r.1   121203651   60S ribosomal protein L18a-like protein 
 ghi-r.1   107960258   60S ribosomal protein L18a-like protein 
 ghi-r.1   107955613   60S ribosomal protein L18a-like protein 
 gma-u.5   100810998   60S ribosomal protein L18a-like protein 
 gma-u.5   100781376   60S ribosomal protein L18a-like protein 
 vvi-u.5   100260767   large ribosomal subunit protein eL20z 
 ppo-u.5   7491359   60S ribosomal protein L18a-like protein 
 mtr-u.5   25487121   60S ribosomal protein L18a-like protein 
 sly-u.5   101264350   large ribosomal subunit protein eL20z 
 sly-u.5   101244058   large ribosomal subunit protein eL20z 
 sly-u.5   101244447   60S ribosomal protein L18a-like protein 
 sot-r.1   102585144   60S ribosomal protein L18a-like protein 
 sot-r.1   102586609   60S ribosomal protein L18a-like protein 
 sot-r.1   102601255   60S ribosomal protein L18a-like protein 
 nta-r.1   107831710   large ribosomal subunit protein eL20z 
 nta-r.1   107828802   large ribosomal subunit protein eL20z-like 
 nta-r.1   107825033   large ribosomal subunit protein eL20z 
 osa-u.5   4339624   large ribosomal subunit protein eL20z 
 osa-u.5   4326318   large ribosomal subunit protein eL20z 
 zma-u.5   103636155   uncharacterized LOC103636155 
 zma-u.5   100273370   60S ribosomal protein L18a-like 
 zma-u.5   100281992   uncharacterized LOC100281992 
 tae-r.2   123183121   60S ribosomal protein L18a-like protein 
 tae-r.2   123077987   60S ribosomal protein L18a-like protein 
 tae-r.2   123052030   60S ribosomal protein L18a-like protein 
 hvu-r.1   123443340   60S ribosomal protein L18a-like protein 
 hvu-r.1   123444056   60S ribosomal protein L18a-like protein 
 hvu-r.1   123426240   serine/arginine repetitive matrix protein 1-like 
 sbi-r.1   8060149   60S ribosomal protein L18a-like protein 
 sbi-r.1   110434018   60S ribosomal protein L18a-like protein 
 sbi-r.1   8074600   60S ribosomal protein L18a-like protein 
 bdi-r.1   104582589   60S ribosomal protein L18a-like protein 

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Top 50 coexpressed genes to AT1G53560 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G53560 (ath-m.4.bio coexpression data)

CoexMap"841791"


athAT1G53560 | Entrez gene ID : 841791      
Species ath bra bna ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre cit
Paralog 10 2 3 3 2 1 1 1 3 3 3 2 3 3 3 3 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_564634.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  chlo 1,  cyto 1,  E.R. 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_564634.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564634.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT1G53560
ath-u.5
for
AT1G53560
ath-r.7
for
AT1G53560
ath-m.9
for
AT1G53560
ath-e.2
for
AT1G53560
ath-m.4.hor
for
AT1G53560
ath-m.4.lig
for
AT1G53560
ath-m.4.str
for
AT1G53560
ath-m.4.tis
for
AT1G53560
ath-u.5
for
AT1G17080
bra-r.6
for
103871119
bra-r.6
for
103835974
bna-r.1
for
106434929
bna-r.1
for
106345935
bna-r.1
for
106387605
ghi-r.1
for
121203651
ghi-r.1
for
107960258
ghi-r.1
for
107955613
gma-u.5
for
100810998
gma-u.5
for
100781376
vvi-u.5
for
100260767
ppo-u.5
for
7491359
mtr-u.5
for
25487121
sly-u.5
for
101264350
sly-u.5
for
101244058
sly-u.5
for
101244447
sot-r.1
for
102585144
sot-r.1
for
102586609
sot-r.1
for
102601255
nta-r.1
for
107831710
nta-r.1
for
107828802
nta-r.1
for
107825033
osa-u.5
for
4339624
osa-u.5
for
4326318
zma-u.5
for
103636155
zma-u.5
for
100273370
zma-u.5
for
100281992
tae-r.2
for
123183121
tae-r.2
for
123077987
tae-r.2
for
123052030
hvu-r.1
for
123443340
hvu-r.1
for
123444056
hvu-r.1
for
123426240
sbi-r.1
for
8060149
sbi-r.1
for
110434018
sbi-r.1
for
8074600
bdi-r.1
for
104582589


Ortholog ID: 2518
Species ath ath bra bra bna bna bna ghi ghi ghi gma gma vvi ppo mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi
Symbol AT1G53560 AT1G17080 LOC103871119 LOC103835974 LOC106434929 LOC106415504 LOC106451484 LOC121203651 LOC107960258 LOC107955613 LOC100810998 LOC100781376 LOC100260767 LOC7491359 LOC25487121 LOC101264350 LOC101244058 LOC101244447 LOC102585144 LOC102586609 LOC102601255 LOC107828802 LOC107825033 LOC107790088 LOC4339624 LOC4326318 LOC103636155 LOC100281992 LOC100284168 LOC123183121 LOC123069487 LOC123146038 LOC123443340 LOC123444056 LOC123450430 LOC8060149 LOC110434018 LOC8074600 LOC104582589
Function* Ribosomal protein L18ae family Ribosomal protein L18ae family 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein large ribosomal subunit protein eL20z 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein large ribosomal subunit protein eL20z large ribosomal subunit protein eL20z 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein large ribosomal subunit protein eL20z-like large ribosomal subunit protein eL20z large ribosomal subunit protein eL20z-like large ribosomal subunit protein eL20z large ribosomal subunit protein eL20z uncharacterized LOC103636155 uncharacterized LOC100281992 uncharacterized LOC100284168 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
ath04142 Lysosome 4
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
ath04144 Endocytosis 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 4
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03010 Ribosome 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03010 Ribosome 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 3
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 4
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 4
zma04144 Endocytosis 3
zma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma00640 Propanoate metabolism 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 2
zma04145 Phagosome 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 5
hvu03050 Proteasome 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 5
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841791 838278 103871119 103835974 106434929 106415504 106451484 121203651 107960258 107955613 100810998 100781376 100260767 7491359 25487121 101264350 101244058 101244447 102585144 102586609 102601255 107828802 107825033 107790088 4339624 4326318 103636155 100281992 100284168 123183121 123069487 123146038 123443340 123444056 123450430 8060149 110434018 8074600 104582589
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