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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   MYB54   myb domain protein 54 
 ath-m.9   MYB54   myb domain protein 54 
 ath-m.4.hor   MYB54   myb domain protein 54 
 ath-m.4.lig   MYB54   myb domain protein 54 
 ath-m.4.str   MYB54   myb domain protein 54 
 ath-m.4.tis   MYB54   myb domain protein 54 
 bra-r.6   103842728   transcription factor MYB52-like 
 ghi-r.1   107923244   transcription factor MYB54 
 cit-r.1   102610482   transcription factor MYB54 
 gma-u.5   100811746   transcription factor MYB52 
 ppo-u.5   18105577   transcription factor MYB54 
 ppo-u.5   7491721   transcription factor MYB54 
 ppo-u.5   7485188   transcription factor MYB54 
 mtr-u.5   11412666   transcription factor MYB52 
 nta-r.1   107770996   transcription factor MYB54-like 
 osa-u.5   4333934   transcription factor MYB52 
 osa-u.5   4325181   transcription factor CSA-like 
 zma-u.5   103625936   transcription factor MYB52 
 zma-u.5   103643927   transcription factor MYB54 
 zma-u.5   100501819   uncharacterized LOC100501819 
 tae-r.2   123058282   transcription factor CSA 
 tae-r.2   123065341   transcription factor CSA 
 tae-r.2   123082343   transcription factor MYB52 
 hvu-r.1   123439787   transcription factor CSA-like 
 hvu-r.1   123451062   transcription factor MYB52-like 
 sbi-r.1   8054657   transcription factor MYB117 
 sbi-r.1   8059988   transcription factor MYB52 
 bdi-r.1   100828549   transcription factor MYB52 

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Top 50 coexpressed genes to MYB54 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MYB54 (ath-m.4.bio coexpression data)

CoexMap"843676"


athMYB54 | Entrez gene ID : 843676      
Species ath bra ghi cit gma ppo mtr nta osa zma tae hvu sbi bdi vvi sot cre sly bna
Paralog 6 1 1 1 1 3 1 1 2 3 3 2 2 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000652 [list] [network] regulation of secondary cell wall biogenesis  (34 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  ISS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323143.1 [sequence] [blastp]
NP_177484.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  extr 1,  pero 1  (predict for NP_001323143.1)
nucl 7,  cyto_nucl 4,  mito 1,  extr 1,  pero 1  (predict for NP_177484.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001323143.1)
other 9  (predict for NP_177484.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
MYB54
ath-m.9
for
MYB54
ath-m.4.hor
for
MYB54
ath-m.4.lig
for
MYB54
ath-m.4.str
for
MYB54
ath-m.4.tis
for
MYB54
bra-r.6
for
103842728
ghi-r.1
for
107923244
cit-r.1
for
102610482
gma-u.5
for
100811746
ppo-u.5
for
18105577
ppo-u.5
for
7491721
ppo-u.5
for
7485188
mtr-u.5
for
11412666
nta-r.1
for
107770996
osa-u.5
for
4333934
osa-u.5
for
4325181
zma-u.5
for
103625936
zma-u.5
for
103643927
zma-u.5
for
100501819
tae-r.2
for
123058282
tae-r.2
for
123065341
tae-r.2
for
123082343
hvu-r.1
for
123439787
hvu-r.1
for
123451062
sbi-r.1
for
8054657
sbi-r.1
for
8059988
bdi-r.1
for
100828549


Ortholog ID: 3278
Species bra ghi cit gma ppo ppo mtr nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi
Symbol LOC103852846 LOC107923244 LOC102610482 LOC100811746 LOC7491721 LOC7485188 LOC11412666 LOC107770996 LOC4333934 LOC4325181 LOC103643927 LOC100501819 LOC123082343 LOC123094376 LOC123099498 LOC123439787 LOC123451062 LOC8054657 LOC8059988 LOC100828549
Function* transcription factor MYB54 transcription factor MYB54 transcription factor MYB54 transcription factor MYB52 transcription factor MYB54 transcription factor MYB54 transcription factor MYB52 transcription factor MYB54-like transcription factor MYB52 transcription factor CSA-like transcription factor MYB54 uncharacterized LOC100501819 transcription factor MYB52 transcription factor MYB52 transcription factor MYB54 transcription factor CSA-like transcription factor MYB52-like transcription factor MYB117 transcription factor MYB52 transcription factor MYB52
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 7
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00941 Flavonoid biosynthesis 3
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04081 Hormone signaling 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 4
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103852846 107923244 102610482 100811746 7491721 7485188 11412666 107770996 4333934 4325181 103643927 100501819 123082343 123094376 123099498 123439787 123451062 8054657 8059988 100828549
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