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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103643927   transcription factor MYB54 
 zma-r.6   103643927   transcription factor MYB54 
 zma-u.5   103625936   transcription factor MYB52 
 zma-u.5   100501819   uncharacterized LOC100501819 
 sbi-r.1   8059988   transcription factor MYB52 
 sbi-r.1   8054657   transcription factor MYB117 
 osa-u.5   4333934   transcription factor MYB52 
 osa-u.5   4325181   transcription factor CSA-like 
 tae-r.2   123094376   transcription factor MYB52 
 tae-r.2   123058282   transcription factor CSA 
 tae-r.2   123065341   transcription factor CSA 
 hvu-r.1   123439787   transcription factor CSA-like 
 hvu-r.1   123451062   transcription factor MYB52-like 
 bdi-r.1   100828549   transcription factor MYB52 
 gma-u.5   100811746   transcription factor MYB52 
 bra-r.6   103852846   transcription factor MYB54 
 bra-r.6   103842728   transcription factor MYB52-like 
 ppo-u.5   7485188   transcription factor MYB54 
 ppo-u.5   7491721   transcription factor MYB54 
 mtr-u.5   11412666   transcription factor MYB52 
 ghi-r.1   107923244   transcription factor MYB54 
 cit-r.1   102610482   transcription factor MYB54 
 nta-r.1   107770996   transcription factor MYB54-like 

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Top 50 coexpressed genes to 103643927 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103643927 (zma-u.5 coexpression data)

CoexMap"103643927"


zmaLOC103643927 | Entrez gene ID : 103643927      
Species zma sbi osa tae hvu bdi gma bra ppo mtr ghi cit nta vvi sot sly bna cre ath
Paralog 4 2 2 3 2 1 1 2 2 1 1 1 1 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (169 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (224 genes)  IEA  
Protein XP_008665319.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_008665319.1)
Subcellular
localization
TargetP
other 9  (predict for XP_008665319.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103643927
zma-r.6
for
103643927
zma-u.5
for
103625936
zma-u.5
for
100501819
sbi-r.1
for
8059988
sbi-r.1
for
8054657
osa-u.5
for
4333934
osa-u.5
for
4325181
tae-r.2
for
123094376
tae-r.2
for
123058282
tae-r.2
for
123065341
hvu-r.1
for
123439787
hvu-r.1
for
123451062
bdi-r.1
for
100828549
gma-u.5
for
100811746
bra-r.6
for
103852846
bra-r.6
for
103842728
ppo-u.5
for
7485188
ppo-u.5
for
7491721
mtr-u.5
for
11412666
ghi-r.1
for
107923244
cit-r.1
for
102610482
nta-r.1
for
107770996


Ortholog ID: 3278
Species zma zma sbi sbi osa osa tae tae tae hvu hvu bdi gma bra ppo ppo mtr ghi cit nta
Symbol LOC103643927 LOC100501819 LOC8059988 LOC8054657 LOC4333934 LOC4325181 LOC123094376 LOC123082343 LOC123099498 LOC123439787 LOC123451062 LOC100828549 LOC100811746 LOC103852846 LOC7485188 LOC7491721 LOC11412666 LOC107923244 LOC102610482 LOC107770996
Function* transcription factor MYB54 uncharacterized LOC100501819 transcription factor MYB52 transcription factor MYB117 transcription factor MYB52 transcription factor CSA-like transcription factor MYB52 transcription factor MYB52 transcription factor MYB54 transcription factor CSA-like transcription factor MYB52-like transcription factor MYB52 transcription factor MYB52 transcription factor MYB54 transcription factor MYB54 transcription factor MYB54 transcription factor MYB52 transcription factor MYB54 transcription factor MYB54 transcription factor MYB54-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 4
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 7
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00941 Flavonoid biosynthesis 3
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04081 Hormone signaling 2
nta00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103643927 100501819 8059988 8054657 4333934 4325181 123094376 123082343 123099498 123439787 123451062 100828549 100811746 103852846 7485188 7491721 11412666 107923244 102610482 107770996
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