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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100247531   protein ANTHESIS POMOTING FACTOR 1 
 vvi-u.5   100247531   protein ANTHESIS POMOTING FACTOR 1 
 vvi-m.5   100247531   protein ANTHESIS POMOTING FACTOR 1 
 ath-u.5   AT5G14530   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100814231   protein ANTHESIS POMOTING FACTOR 1 
 gma-u.5   100776353   WD repeat-containing protein 82-like 
 bra-r.6   103850935   protein ANTHESIS POMOTING FACTOR 1 
 ppo-u.5   7487869   protein ANTHESIS POMOTING FACTOR 1 
 ppo-u.5   7461320   protein ANTHESIS POMOTING FACTOR 1 
 mtr-u.5   25495223   protein ANTHESIS POMOTING FACTOR 1 
 ghi-r.1   107914232   protein ANTHESIS POMOTING FACTOR 1 
 ghi-r.1   107897564   protein ANTHESIS POMOTING FACTOR 1 
 bna-r.1   106429889   protein ANTHESIS POMOTING FACTOR 1 
 cit-r.1   102623395   protein ANTHESIS POMOTING FACTOR 1 
 sly-u.5   101250377   protein ANTHESIS POMOTING FACTOR 1 
 sot-r.1   102601551   WD repeat-containing protein 82-B 
 nta-r.1   107818263   protein ANTHESIS POMOTING FACTOR 1 
 nta-r.1   107781691   protein ANTHESIS POMOTING FACTOR 1-like 
 osa-u.5   4339488   protein ANTHESIS POMOTING FACTOR 1 
 zma-u.5   100285923   set1 complex component swd2 
 zma-u.5   100285399   set1 complex component swd2 
 tae-r.2   123182858   protein ANTHESIS POMOTING FACTOR 1 
 tae-r.2   123143096   protein ANTHESIS POMOTING FACTOR 1 
 tae-r.2   123065554   protein ANTHESIS POMOTING FACTOR 1 
 hvu-r.1   123447972   protein ANTHESIS POMOTING FACTOR 1 
 sbi-r.1   8061091   protein ANTHESIS POMOTING FACTOR 1 
 bdi-r.1   100820899   protein ANTHESIS POMOTING FACTOR 1 

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Top 50 coexpressed genes to 100247531 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100247531 (vvi-r.5 coexpression data)

CoexMap""


vviLOC100247531 | Entrez gene ID : 100247531      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 2 1 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function protein ANTHESIS POMOTING FACTOR 1
KEGG vvi03015 [list] [network] mRNA surveillance pathway (113 genes)
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (6 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (124 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002275160.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002275160.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002275160.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100247531
vvi-u.5
for
100247531
vvi-m.5
for
100247531
ath-u.5
for
AT5G14530
gma-u.5
for
100814231
gma-u.5
for
100776353
bra-r.6
for
103850935
ppo-u.5
for
7487869
ppo-u.5
for
7461320
mtr-u.5
for
25495223
ghi-r.1
for
107914232
ghi-r.1
for
107897564
bna-r.1
for
106429889
cit-r.1
for
102623395
sly-u.5
for
101250377
sot-r.1
for
102601551
nta-r.1
for
107818263
nta-r.1
for
107781691
osa-u.5
for
4339488
zma-u.5
for
100285923
zma-u.5
for
100285399
tae-r.2
for
123182858
tae-r.2
for
123143096
tae-r.2
for
123065554
hvu-r.1
for
123447972
sbi-r.1
for
8061091
bdi-r.1
for
100820899

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Ortholog ID: 10297
Species vvi ath gma gma bra ppo ppo mtr ghi ghi bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100247531 AT5G14530 LOC100814231 LOC100776353 LOC103850935 LOC7487869 LOC7461320 LOC25495223 LOC107914232 LOC107897564 LOC106429889 LOC102623395 LOC101250377 LOC102601551 LOC107818263 LOC107781691 LOC4339488 LOC100285923 LOC100285399 LOC123182858 LOC123143096 LOC123065554 LOC123447972 LOC8061091 LOC100820899
Function* protein ANTHESIS POMOTING FACTOR 1 Transducin/WD40 repeat-like superfamily protein protein ANTHESIS POMOTING FACTOR 1 WD repeat-containing protein 82-like protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 WD repeat-containing protein 82-B protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1-like protein ANTHESIS POMOTING FACTOR 1 set1 complex component swd2 set1 complex component swd2 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03082 ATP-dependent chromatin remodeling 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04142 Lysosome 4
sly04145 Phagosome 4
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03082 ATP-dependent chromatin remodeling 2
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 7
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 8
tae01230 Biosynthesis of amino acids 8
tae03015 mRNA surveillance pathway 4
tae00470 D-Amino acid metabolism 3
tae00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 5
tae01230 Biosynthesis of amino acids 5
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 3
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae04382 Cornified envelope formation 3
tae00300 Lysine biosynthesis 3
tae00470 D-Amino acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100247531 831304 100814231 100776353 103850935 7487869 7461320 25495223 107914232 107897564 106429889 102623395 101250377 102601551 107818263 107781691 4339488 100285923 100285399 123182858 123143096 123065554 123447972 8061091 100820899
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