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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461320   protein ANTHESIS POMOTING FACTOR 1 
 ppo-r.4   7461320   protein ANTHESIS POMOTING FACTOR 1 
 ppo-u.5   7487869   protein ANTHESIS POMOTING FACTOR 1 
 gma-u.5   100814231   protein ANTHESIS POMOTING FACTOR 1 
 gma-u.5   100776353   WD repeat-containing protein 82-like 
 mtr-u.5   25495223   protein ANTHESIS POMOTING FACTOR 1 
 ath-u.5   AT5G14530   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100247531   protein ANTHESIS POMOTING FACTOR 1 
 sly-u.5   101250377   protein ANTHESIS POMOTING FACTOR 1 
 osa-u.5   4339488   protein ANTHESIS POMOTING FACTOR 1 
 zma-u.5   100285923   set1 complex component swd2 
 zma-u.5   100285399   set1 complex component swd2 

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Top 50 coexpressed genes to 7461320 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461320 (ppo-u.5 coexpression data)

CoexMap"7461320"


ppoLOC7461320 | Entrez gene ID : 7461320    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03015 [list] [network] mRNA surveillance pathway (164 genes)
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (11 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (170 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002324005.2 [sequence] [blastp]
XP_024444280.1 [sequence] [blastp]
XP_024444281.1 [sequence] [blastp]
XP_024444282.1 [sequence] [blastp]
XP_024444283.1 [sequence] [blastp]
XP_024444284.1 [sequence] [blastp]
XP_052304189.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_002324005.2)
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_024444280.1)
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_024444281.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for XP_024444282.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for XP_024444283.1)
cyto 5,  nucl 2,  chlo 1,  extr 1,  cysk 1,  golg 1  (predict for XP_024444284.1)
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_052304189.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002324005.2)
other 9  (predict for XP_024444280.1)
other 9  (predict for XP_024444281.1)
other 9  (predict for XP_024444282.1)
other 9  (predict for XP_024444283.1)
other 9  (predict for XP_024444284.1)
other 9  (predict for XP_052304189.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461320

.
ppo-r.4
for
7461320

.
ppo-u.5
for
7487869

.
gma-u.5
for
100814231

.
gma-u.5
for
100776353

.
mtr-u.5
for
25495223

.
ath-u.5
for
AT5G14530

.
vvi-u.5
for
100247531

.
sly-u.5
for
101250377

.
osa-u.5
for
4339488

.
zma-u.5
for
100285923

.
zma-u.5
for
100285399

.


Ortholog ID: 10297
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol AT5G14530 LOC100814231 LOC100776353 LOC101250377 LOC4339488 LOC100285399 LOC100285923 LOC103850935 LOC100247531 LOC7487869 LOC7461320 LOC25495223 LOC123182858 LOC123143096 LOC123447972 LOC107897564 LOC107914232 LOC106429889 LOC8061091 LOC102601551 LOC102623395 LOC100820899 LOC107818263 LOC107781691
Function* Transducin/WD40 repeat-like superfamily protein protein ANTHESIS POMOTING FACTOR 1 WD repeat-containing protein 82-like protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 set1 complex component swd2 set1 complex component swd2 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 WD repeat-containing protein 82-B protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03082 ATP-dependent chromatin remodeling 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04142 Lysosome 4
sly04145 Phagosome 4
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 8
tae01230 Biosynthesis of amino acids 8
tae03015 mRNA surveillance pathway 4
tae00470 D-Amino acid metabolism 3
tae00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 5
tae01230 Biosynthesis of amino acids 5
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 3
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03082 ATP-dependent chromatin remodeling 2
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 7
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831304 100814231 100776353 101250377 4339488 100285399 100285923 103850935 100247531 7487869 7461320 25495223 123182858 123143096 123447972 107897564 107914232 106429889 8061091 102601551 102623395 100820899 107818263 107781691
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