Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100256152   pentatricopeptide repeat-containing protein At5g15300 
 vvi-u.5   100256152   pentatricopeptide repeat-containing protein At5g15300 
 bra-r.6   103846423   pentatricopeptide repeat-containing protein At5g15300 
 ppo-u.5   7482486   pentatricopeptide repeat-containing protein At5g15300 
 mtr-u.5   11422415   pentatricopeptide repeat-containing protein At5g15300 
 ghi-r.1   107955508   pentatricopeptide repeat-containing protein At5g15300 
 ghi-r.1   107940760   pentatricopeptide repeat-containing protein At5g15300-like 
 cit-r.1   102621024   pentatricopeptide repeat-containing protein At5g15300 
 sly-u.5   101250759   pentatricopeptide repeat-containing protein At5g15300 
 sot-r.1   102602763   pentatricopeptide repeat-containing protein At5g15300 
 nta-r.1   107769032   pentatricopeptide repeat-containing protein At5g15300-like 
 nta-r.1   107765943   pentatricopeptide repeat-containing protein At5g15300-like 
 zma-u.5   100279802   uncharacterized LOC100279802 
 tae-r.2   123093294   pentatricopeptide repeat-containing protein At5g15300 
 hvu-r.1   123447063   pentatricopeptide repeat-containing protein At5g15300 

close


Top 50 coexpressed genes to 100256152 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100256152 (vvi-r.5 coexpression data)

CoexMap"100256152"


vviLOC100256152 | Entrez gene ID : 100256152      
Species vvi bra ppo mtr ghi cit sly sot nta zma tae hvu sbi osa gma ath bna cre bdi
Paralog 2 1 1 1 2 1 1 1 2 1 1 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002283796.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4,  cyto_mito 4  (predict for XP_002283796.2)
Subcellular
localization
TargetP
mito 9  (predict for XP_002283796.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100256152
vvi-u.5
for
100256152
bra-r.6
for
103846423
ppo-u.5
for
7482486
mtr-u.5
for
11422415
ghi-r.1
for
107955508
ghi-r.1
for
107940760
cit-r.1
for
102621024
sly-u.5
for
101250759
sot-r.1
for
102602763
nta-r.1
for
107769032
nta-r.1
for
107765943
zma-u.5
for
100279802
tae-r.2
for
123093294
hvu-r.1
for
123447063


Ortholog ID: 11408
Species vvi bra ppo mtr ghi ghi cit sly sot nta nta zma tae hvu
Symbol LOC100256152 LOC103846423 LOC7482486 LOC11422415 LOC107955508 LOC107940760 LOC102621024 LOC101250759 LOC102602763 LOC107769032 LOC107765943 LOC100279802 LOC123093294 LOC123447063
Function* pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300-like pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300-like pentatricopeptide repeat-containing protein At5g15300-like uncharacterized LOC100279802 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100256152 103846423 7482486 11422415 107955508 107940760 102621024 101250759 102602763 107769032 107765943 100279802 123093294 123447063
The preparation time of this page was 0.2 [sec].