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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123447063  pentatricopeptide repeat-containing protein At5g15300 
 zma-u.5  100279802  uncharacterized LOC100279802 
 sly-u.5  101250759  pentatricopeptide repeat-containing protein At5g15300 
 vvi-u.5  100256152  pentatricopeptide repeat-containing protein At5g15300 
 ppo-u.5  7482486  pentatricopeptide repeat-containing protein At5g15300 
 mtr-u.5  11422415  pentatricopeptide repeat-containing protein At5g15300 

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Top 50 coexpressed genes to 123447063 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123447063 (hvu-r.1 coexpression data)

CoexMap"123447063"


hvuLOC123447063 | Entrez gene ID : 123447063
Species hvu zma sly vvi ppo mtr bdi bra cit gma bna ath sbi ghi osa sot nta cre tae
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044979561.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_044979561.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044979561.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123447063


zma-u.5
for
100279802


sly-u.5
for
101250759


vvi-u.5
for
100256152


ppo-u.5
for
7482486


mtr-u.5
for
11422415



Ortholog ID: 11408
Species hvu tae zma sly bra vvi ppo mtr ghi ghi sot cit nta nta
Symbol LOC123447063 LOC123093294 LOC100279802 LOC101250759 LOC103846423 LOC100256152 LOC7482486 LOC11422415 LOC107955508 LOC107940760 LOC102602763 LOC102621024 LOC107765943 LOC107769032
Function* pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 uncharacterized LOC100279802 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300-like pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300 pentatricopeptide repeat-containing protein At5g15300-like pentatricopeptide repeat-containing protein At5g15300-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123447063 123093294 100279802 101250759 103846423 100256152 7482486 11422415 107955508 107940760 102602763 102621024 107765943 107769032
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