ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-r.5	100258564	uncharacterized LOC100258564
vvi-u.5	100258564	uncharacterized LOC100258564
vvi-m.5	100258564	uncharacterized LOC100258564
vvi-u.5	100253839	uncharacterized LOC100253839
ath-u.5	AT4G03410	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
ath-u.5	AT1G52870	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
gma-u.5	106798699	uncharacterized LOC106798699
gma-u.5	100805057	uncharacterized LOC100805057
gma-u.5	100789384	protein SYM1
bra-r.6	103871177	uncharacterized LOC103871177
bra-r.6	103858698	protein SYM1
ppo-u.5	7460845	uncharacterized LOC7460845
ppo-u.5	18095627	protein SYM1
ppo-u.5	18108584	uncharacterized LOC18108584
mtr-u.5	25487391	uncharacterized LOC25487391
mtr-u.5	25487620	protein SYM1
ghi-r.1	121212389	peroxisomal membrane protein 2
ghi-r.1	107952157	uncharacterized LOC107952157
ghi-r.1	107925395	peroxisomal membrane protein 2
bna-r.1	125588745	uncharacterized LOC125588745
bna-r.1	BNAC06G05870D	uncharacterized BNAC06G05870D
bna-r.1	106436240	protein SYM1
cit-r.1	102611604	hypothetical protein
cit-r.1	102614505	uncharacterized LOC102614505
sly-u.5	101259677	protein SYM1
sly-u.5	101247444	uncharacterized LOC101247444
sot-r.1	102595985	protein SYM1-like
sot-r.1	102590255	uncharacterized LOC102590255
nta-r.1	107799776	uncharacterized LOC107799776
nta-r.1	107805063	uncharacterized LOC107805063
nta-r.1	107808489	uncharacterized LOC107808489
osa-u.5	4333336	uncharacterized LOC4333336
osa-u.5	4346695	protein SYM1
zma-u.5	100216568	uncharacterized LOC100216568
zma-u.5	100285035	mpv17 / PMP22 family protein
tae-r.2	123042863	protein SYM1
tae-r.2	123055311	protein SYM1
tae-r.2	123180577	protein SYM1
hvu-r.1	123449048	uncharacterized LOC123449048
hvu-r.1	123426040	protein SYM1-like
sbi-r.1	8064554	uncharacterized LOC8064554
bdi-r.1	100846887	uncharacterized LOC100846887
cre-r.1	CHLRE_06g297900v5	uncharacterized protein

Top 50 coexpressed genes to 100258564 (vvi-r.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100258564 (vvi-r.5 coexpression data)

CoexMap"100258564"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi04146 [list] [network] Peroxisome (75 genes)

GO BP

GO CC

GO:0016020 [list] [network] membrane	(2991 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4496 genes)	IEA

GO MF

Protein

XP_010657274.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_010657274.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_010657274.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-r.5 for 100258564	vvi-u.5 for 100258564	vvi-m.5 for 100258564	vvi-u.5 for 100253839	ath-u.5 for AT4G03410	ath-u.5 for AT1G52870	gma-u.5 for 106798699	gma-u.5 for 100805057	gma-u.5 for 100789384	bra-r.6 for 103871177	bra-r.6 for 103858698	ppo-u.5 for 7460845	ppo-u.5 for 18095627	ppo-u.5 for 18108584	mtr-u.5 for 25487391	mtr-u.5 for 25487620	ghi-r.1 for 121212389	ghi-r.1 for 107952157	ghi-r.1 for 107925395	bna-r.1 for 125588745	bna-r.1 for BNAC06G05870D	bna-r.1 for 106436240	cit-r.1 for 102611604	cit-r.1 for 102614505	sly-u.5 for 101259677	sly-u.5 for 101247444	sot-r.1 for 102595985	sot-r.1 for 102590255	nta-r.1 for 107799776	nta-r.1 for 107805063	nta-r.1 for 107808489	osa-u.5 for 4333336	osa-u.5 for 4346695	zma-u.5 for 100216568	zma-u.5 for 100285035	tae-r.2 for 123042863	tae-r.2 for 123055311	tae-r.2 for 123180577	hvu-r.1 for 123449048	hvu-r.1 for 123426040	sbi-r.1 for 8064554	bdi-r.1 for 100846887	cre-r.1 for CHLRE_06g297900v5

Ortholog

Ortholog ID: 3602

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100258564

uncharacterized LOC100253839

Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

uncharacterized LOC106798699

protein SYM1

uncharacterized LOC100786706

uncharacterized LOC103871177

protein SYM1

uncharacterized LOC7460845

protein SYM1

uncharacterized LOC18108584

uncharacterized LOC25487391

protein SYM1

uncharacterized LOC107952157

peroxisomal membrane protein 2

uncharacterized LOC107903543

uncharacterized LOC125588745

uncharacterized BNAC06G05870D

protein SYM1

hypothetical protein

uncharacterized LOC102614505

protein SYM1

uncharacterized LOC101247444

protein SYM1-like

uncharacterized LOC102590255

uncharacterized LOC107799776

uncharacterized LOC107805063

uncharacterized LOC107789335

uncharacterized LOC4333336

protein SYM1

uncharacterized LOC100216568

mpv17 / PMP22 family protein

protein SYM1

uncharacterized LOC123449048

protein SYM1-like

uncharacterized LOC8064554

uncharacterized LOC100846887

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04146	Peroxisome	2
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	4
ppo00380	Tryptophan metabolism	2
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo01200	Carbon metabolism	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi04146	Peroxisome	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi04146	Peroxisome	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	4
cit00195	Photosynthesis	3
cit00051	Fructose and mannose metabolism	2
cit00710	Carbon fixation by Calvin cycle	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	5
sly04141	Protein processing in endoplasmic reticulum	4
sly00290	Valine, leucine and isoleucine biosynthesis	3
sly01210	2-Oxocarboxylic acid metabolism	3
sly00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	3
tae04146	Peroxisome	3
tae00480	Glutathione metabolism	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	5
tae04146	Peroxisome	3
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae00480	Glutathione metabolism	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	3
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

100258564

100253839

827932

841720

106798699

100789384

100786706

103871177

103858698

7460845

18095627

18108584

25487391

25487620

107952157

107925395

107903543

125588745

106405987

106438733

102611604

102614505

101259677

101247444

102595985

102590255

107799776

107805063

107789335

4333336

4346695

100216568

100285035

123042863

123180577

123191135

123449048

123426040

8064554

100846887

5717028

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	3	2	3	3	2	2	2	3	2	2	3	2	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100258564 (vvi-r.5 coexpression data)

Top 50 enrichment test to 100258564 (vvi-r.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**