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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100259575   RNA exonuclease 4 
 vvi-u.5   100259575   RNA exonuclease 4 
 ath-u.5   AT2G48100   Exonuclease family protein 
 gma-u.5   100805841   apoptosis-enhancing nuclease 
 gma-u.5   100788682   apoptosis-enhancing nuclease-like 
 bra-r.6   103875174   RNA exonuclease 4 
 bra-r.6   103864230   RNA exonuclease 4-like 
 ppo-u.5   7458251   RNA exonuclease 4 
 mtr-u.5   11436346   apoptosis-enhancing nuclease 
 ghi-r.1   107912411   RNA exonuclease 4 
 ghi-r.1   107922930   apoptosis-enhancing nuclease 
 bna-r.1   106454451   RNA exonuclease 4-like 
 bna-r.1   106428329   RNA exonuclease 4-like 
 cit-r.1   102627850   RNA exonuclease 4 
 sly-u.5   101249487   RNA exonuclease 4 
 sot-r.1   102582548   uncharacterized LOC102582548 
 nta-r.1   107827804   RNA exonuclease 4 
 zma-u.5   100282203   RNA exonuclease 4 
 sbi-r.1   8073849   RNA exonuclease 4 

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Top 50 coexpressed genes to 100259575 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100259575 (vvi-r.5 coexpression data)

CoexMap"100259575"


vviLOC100259575 | Entrez gene ID : 100259575    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta zma sbi osa tae hvu cre bdi
Paralog 2 1 2 2 1 1 2 2 1 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (198 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (60 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3261 genes)  IEA  
Protein XP_010652121.1 [sequence] [blastp]
XP_010652122.1 [sequence] [blastp]
XP_010652124.1 [sequence] [blastp]
XP_010652125.1 [sequence] [blastp]
XP_059593830.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_010652121.1)
nucl 8,  cyto 1  (predict for XP_010652122.1)
nucl 7,  cyto 3  (predict for XP_010652124.1)
mito 4,  nucl 4,  cyto_mito 2,  chlo 1  (predict for XP_010652125.1)
nucl 7,  cyto 3  (predict for XP_059593830.1)
Subcellular
localization
TargetP
other 7  (predict for XP_010652121.1)
other 7  (predict for XP_010652122.1)
other 7  (predict for XP_010652124.1)
mito 4  (predict for XP_010652125.1)
other 7  (predict for XP_059593830.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100259575
vvi-u.5
for
100259575
ath-u.5
for
AT2G48100
gma-u.5
for
100805841
gma-u.5
for
100788682
bra-r.6
for
103875174
bra-r.6
for
103864230
ppo-u.5
for
7458251
mtr-u.5
for
11436346
ghi-r.1
for
107912411
ghi-r.1
for
107922930
bna-r.1
for
106454451
bna-r.1
for
106428329
cit-r.1
for
102627850
sly-u.5
for
101249487
sot-r.1
for
102582548
nta-r.1
for
107827804
zma-u.5
for
100282203
sbi-r.1
for
8073849


Ortholog ID: 3217
Species vvi ath gma gma bra ppo mtr ghi bna cit sly sot nta zma sbi
Symbol LOC100259575 AT2G48100 LOC100805841 LOC100788682 LOC103875174 LOC7458251 LOC11436346 LOC107912411 LOC106404432 LOC102627850 LOC101249487 LOC102582548 LOC107827804 LOC100282203 LOC8073849
Function* RNA exonuclease 4 Exonuclease family protein apoptosis-enhancing nuclease apoptosis-enhancing nuclease-like RNA exonuclease 4 RNA exonuclease 4 apoptosis-enhancing nuclease RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC102582548 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 3
mtr03083 Polycomb repressive complex 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi00270 Cysteine and methionine metabolism 2
ghi00480 Glutathione metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100259575 819422 100805841 100788682 103875174 7458251 11436346 107912411 106404432 102627850 101249487 102582548 107827804 100282203 8073849
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