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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7458251   RNA exonuclease 4 
 ppo-r.4   7458251   RNA exonuclease 4 
 gma-u.5   100805841   apoptosis-enhancing nuclease 
 gma-u.5   100788682   apoptosis-enhancing nuclease-like 
 mtr-u.5   11436346   apoptosis-enhancing nuclease 
 ath-u.5   AT2G48100   Exonuclease family protein 
 vvi-u.5   100259575   RNA exonuclease 4 
 sly-u.5   101249487   RNA exonuclease 4 
 zma-u.5   100282203   RNA exonuclease 4 

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Top 50 coexpressed genes to 7458251 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7458251 (ppo-u.5 coexpression data)

CoexMap"7458251"


ppoLOC7458251 | Entrez gene ID : 7458251    
Species ppo gma mtr ath vvi sly zma hvu bna cit bra ghi osa sbi bdi nta tae cre sot
Paralog 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (232 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (72 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_006386818.3 [sequence] [blastp]
XP_024450411.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1  (predict for XP_006386818.3)
nucl 6,  cyto 2,  chlo 1,  pero 1  (predict for XP_024450411.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006386818.3)
other 9  (predict for XP_024450411.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7458251
ppo-r.4
for
7458251
gma-u.5
for
100805841
gma-u.5
for
100788682
mtr-u.5
for
11436346
ath-u.5
for
AT2G48100
vvi-u.5
for
100259575
sly-u.5
for
101249487
zma-u.5
for
100282203


Ortholog ID: 3217
Species ppo gma mtr ath bra vvi cit sot nta zma sbi
Symbol LOC7458251 LOC100788682 LOC11436346 AT2G48100 LOC103875174 LOC100259575 LOC102627850 LOC102582548 LOC107827804 LOC100282203 LOC8073849
Function* RNA exonuclease 4 apoptosis-enhancing nuclease-like apoptosis-enhancing nuclease Exonuclease family protein RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC102582548 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 3
mtr03083 Polycomb repressive complex 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7458251 100788682 11436346 819422 103875174 100259575 102627850 102582548 107827804 100282203 8073849
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