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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100267428   pentatricopeptide repeat-containing protein At3g18970 
 vvi-u.5   100267428   pentatricopeptide repeat-containing protein At3g18970 
 ath-u.5   MEF20   mitochondrial editing factor 20 
 gma-u.5   100790613   pentatricopeptide repeat-containing protein At3g18970 
 gma-u.5   102664218   pentatricopeptide repeat-containing protein At3g18970 
 bra-r.6   103869506   pentatricopeptide repeat-containing protein At3g18970 
 mtr-u.5   25490349   pentatricopeptide repeat-containing protein At3g18970 
 ghi-r.1   107891136   pentatricopeptide repeat-containing protein At3g18970 
 ghi-r.1   107913617   pentatricopeptide repeat-containing protein At3g18970 
 cit-r.1   102615683   pentatricopeptide repeat-containing protein At3g18970 

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Top 50 coexpressed genes to 100267428 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100267428 (vvi-r.5 coexpression data)

CoexMap"100267428"


vviLOC100267428 | Entrez gene ID : 100267428      
Species vvi ath gma bra mtr ghi cit sbi osa sot sly tae bna hvu ppo zma cre nta bdi
Paralog 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002274803.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002274803.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_002274803.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100267428
vvi-u.5
for
100267428
ath-u.5
for
MEF20
gma-u.5
for
100790613
gma-u.5
for
102664218
bra-r.6
for
103869506
mtr-u.5
for
25490349
ghi-r.1
for
107891136
ghi-r.1
for
107913617
cit-r.1
for
102615683


Ortholog ID: 14733
Species vvi ath gma gma bra mtr ghi ghi cit
Symbol LOC100267428 MEF20 LOC100790613 LOC102664218 LOC103869506 LOC25490349 LOC107891136 LOC107913617 LOC102615683
Function* pentatricopeptide repeat-containing protein At3g18970 mitochondrial editing factor 20 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 2
gma00780 Biotin metabolism 2
gma01212 Fatty acid metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100267428 821430 100790613 102664218 103869506 25490349 107891136 107913617 102615683
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