Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891136   pentatricopeptide repeat-containing protein At3g18970 
 ath-u.5   MEF20   mitochondrial editing factor 20 
 gma-u.5   102664218   pentatricopeptide repeat-containing protein At3g18970 
 gma-u.5   100790613   pentatricopeptide repeat-containing protein At3g18970 
 vvi-u.5   100267428   pentatricopeptide repeat-containing protein At3g18970 
 mtr-u.5   25490349   pentatricopeptide repeat-containing protein At3g18970 

close


Top 50 coexpressed genes to 107891136 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107891136 (ghi-r.1 coexpression data)

CoexMap"107891136"


ghiLOC107891136 | Entrez gene ID : 107891136    
Species ghi ath gma vvi mtr hvu zma bna sly cit bra osa ppo sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080156 [list] [network] mitochondrial mRNA modification  (35 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016671308.2 [sequence] [blastp]
XP_016671317.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  nucl 1,  mito 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016671308.2)
chlo 6,  cyto 1,  nucl 1,  mito 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016671317.2)
Subcellular
localization
TargetP
mito 1  (predict for XP_016671308.2)
mito 1  (predict for XP_016671317.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891136
ath-u.5
for
MEF20
gma-u.5
for
102664218
gma-u.5
for
100790613
vvi-u.5
for
100267428
mtr-u.5
for
25490349


Ortholog ID: 14733
Species ghi ghi ath bra cit gma gma vvi mtr
Symbol LOC107913617 LOC107891136 MEF20 LOC103869506 LOC102615683 LOC102664218 LOC100790613 LOC100267428 LOC25490349
Function* pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 mitochondrial editing factor 20 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970 pentatricopeptide repeat-containing protein At3g18970
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 2
gma00780 Biotin metabolism 2
gma01212 Fatty acid metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913617 107891136 821430 103869506 102615683 102664218 100790613 100267428 25490349
The preparation time of this page was 0.1 [sec].