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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242520   dihydroxy-acid dehydratase, chloroplastic 
 vvi-r.5   100242520   dihydroxy-acid dehydratase, chloroplastic 
 vvi-m.5   100242520   dihydroxy-acid dehydratase, chloroplastic 
 ath-u.5   AT3G23940   dehydratase family 
 gma-u.5   100806689   putative dihydroxy-acid dehydratase, mitochondrial-like 
 bra-r.6   103831845   dihydroxy-acid dehydratase, chloroplastic 
 bra-r.6   103828655   dihydroxy-acid dehydratase, chloroplastic 
 ppo-u.5   7478279   dihydroxy-acid dehydratase, chloroplastic 
 ppo-u.5   7460521   dihydroxy-acid dehydratase, chloroplastic 
 mtr-u.5   11422645   dihydroxy-acid dehydratase, chloroplastic 
 ghi-r.1   107897843   dihydroxy-acid dehydratase, chloroplastic 
 ghi-r.1   107957083   dihydroxy-acid dehydratase, chloroplastic 
 ghi-r.1   107927784   dihydroxy-acid dehydratase, chloroplastic 
 bna-r.1   106451505   dihydroxy-acid dehydratase, chloroplastic 
 bna-r.1   106452467   dihydroxy-acid dehydratase, chloroplastic 
 bna-r.1   106450576   dihydroxy-acid dehydratase, chloroplastic 
 cit-r.1   102607008   dihydroxy-acid dehydratase, chloroplastic 
 sly-u.5   101264707   dihydroxy-acid dehydratase-like 
 sly-u.5   101246533   dihydroxy-acid dehydratase, chloroplastic 
 sot-r.1   102606211   dihydroxy-acid dehydratase, chloroplastic-like 
 sot-r.1   102603493   dihydroxy-acid dehydratase, chloroplastic-like 
 nta-r.1   107787836   dihydroxy-acid dehydratase, chloroplastic 
 nta-r.1   107782074   dihydroxy-acid dehydratase, chloroplastic-like 
 osa-u.5   4346318   dihydroxy-acid dehydratase, chloroplastic 
 zma-u.5   100273676   Dihydroxy-acid dehydratase chloroplastic 
 zma-u.5   100384514   Dihydroxy-acid dehydratase chloroplastic 
 tae-r.2   123165567   dihydroxy-acid dehydratase, chloroplastic 
 tae-r.2   123157147   dihydroxy-acid dehydratase, chloroplastic 
 tae-r.2   123153596   dihydroxy-acid dehydratase, chloroplastic 
 hvu-r.1   123407417   dihydroxy-acid dehydratase, chloroplastic 
 sbi-r.1   8057977   dihydroxy-acid dehydratase, chloroplastic 
 bdi-r.1   100829216   dihydroxy-acid dehydratase, chloroplastic 
 cre-r.1   CHLRE_03g206600v5   uncharacterized protein 

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Top 50 coexpressed genes to 100242520 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242520 (vvi-u.5 coexpression data)

CoexMap"100242520"


vviLOC100242520 | Entrez gene ID : 100242520      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 2 1 3 3 1 2 2 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00290 [list] [network] Valine, leucine and isoleucine biosynthesis (17 genes)
vvi00770 [list] [network] Pantothenate and CoA biosynthesis (36 genes)
vvi01210 [list] [network] 2-Oxocarboxylic acid metabolism (81 genes)
vvi01230 [list] [network] Biosynthesis of amino acids (211 genes)
GO BP
GO:0009082 [list] [network] branched-chain amino acid biosynthetic process  (12 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (103 genes)  IEA  
GO MF
GO:0004160 [list] [network] dihydroxy-acid dehydratase activity  (1 genes)  IEA  
Protein XP_002285667.1 [sequence] [blastp]
XP_059592953.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_002285667.1)
chlo 7,  mito 3  (predict for XP_059592953.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002285667.1)
chlo 9  (predict for XP_059592953.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242520
vvi-r.5
for
100242520
vvi-m.5
for
100242520
ath-u.5
for
AT3G23940
gma-u.5
for
100806689
bra-r.6
for
103831845
bra-r.6
for
103828655
ppo-u.5
for
7478279
ppo-u.5
for
7460521
mtr-u.5
for
11422645
ghi-r.1
for
107897843
ghi-r.1
for
107957083
ghi-r.1
for
107927784
bna-r.1
for
106451505
bna-r.1
for
106452467
bna-r.1
for
106450576
cit-r.1
for
102607008
sly-u.5
for
101264707
sly-u.5
for
101246533
sot-r.1
for
102606211
sot-r.1
for
102603493
nta-r.1
for
107787836
nta-r.1
for
107782074
osa-u.5
for
4346318
zma-u.5
for
100273676
zma-u.5
for
100384514
tae-r.2
for
123165567
tae-r.2
for
123157147
tae-r.2
for
123153596
hvu-r.1
for
123407417
sbi-r.1
for
8057977
bdi-r.1
for
100829216
cre-r.1
for
CHLRE_03g206600v5


Ortholog ID: 6570
Species vvi ath gma bra bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC100242520 AT3G23940 LOC100806689 LOC103831845 LOC103828655 LOC7478279 LOC7460521 LOC11422645 LOC107957083 LOC107927784 LOC107914890 LOC106451505 LOC106450576 LOC106432460 LOC102607008 LOC101264707 LOC101246533 LOC102606211 LOC102603493 LOC107787836 LOC107782074 LOC4346318 LOC100273676 LOC100384514 LOC123165567 LOC123157147 LOC123153596 LOC123407417 LOC8057977 LOC100829216 CHLRE_03g206600v5
Function* dihydroxy-acid dehydratase, chloroplastic dehydratase family putative dihydroxy-acid dehydratase, mitochondrial-like dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase-like dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic-like dihydroxy-acid dehydratase, chloroplastic-like dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic-like dihydroxy-acid dehydratase, chloroplastic Dihydroxy-acid dehydratase chloroplastic Dihydroxy-acid dehydratase chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 3
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 14
ath00300 Lysine biosynthesis 6
ath00230 Purine metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma00053 Ascorbate and aldarate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra00250 Alanine, aspartate and glutamate metabolism 4
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 4
bra01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 6
bra00250 Alanine, aspartate and glutamate metabolism 5
bra01240 Biosynthesis of cofactors 5
bra00230 Purine metabolism 4
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00770 Pantothenate and CoA biosynthesis 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00770 Pantothenate and CoA biosynthesis 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00770 Pantothenate and CoA biosynthesis 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit04626 Plant-pathogen interaction 3
cit01230 Biosynthesis of amino acids 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot00220 Arginine biosynthesis 3
sot00240 Pyrimidine metabolism 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot01240 Biosynthesis of cofactors 5
sot00061 Fatty acid biosynthesis 4
sot01212 Fatty acid metabolism 4
sot00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa00230 Purine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 3
osa00250 Alanine, aspartate and glutamate metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma01230 Biosynthesis of amino acids 4
zma00770 Pantothenate and CoA biosynthesis 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma01230 Biosynthesis of amino acids 3
zma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae01232 Nucleotide metabolism 6
tae01230 Biosynthesis of amino acids 4
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 4
tae01232 Nucleotide metabolism 4
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu03018 RNA degradation 3
hvu00300 Lysine biosynthesis 3
hvu00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 3
bdi01240 Biosynthesis of cofactors 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
cre01230 Biosynthesis of amino acids 3
cre03008 Ribosome biogenesis in eukaryotes 2
cre01240 Biosynthesis of cofactors 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242520 821977 100806689 103831845 103828655 7478279 7460521 11422645 107957083 107927784 107914890 106451505 106450576 106432460 102607008 101264707 101246533 102606211 102603493 107787836 107782074 4346318 100273676 100384514 123165567 123157147 123153596 123407417 8057977 100829216 5718841
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