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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257596   sister chromatid cohesion 1 protein 2 
 vvi-r.5   100257596   sister chromatid cohesion 1 protein 2 
 ath-u.5   SYN2   Rad21/Rec8-like family protein 
 gma-u.5   100810733   sister chromatid cohesion 1 protein 2 
 bra-r.6   103864028   sister chromatid cohesion 1 protein 2 
 ppo-u.5   18107254   sister chromatid cohesion 1 protein 2 
 mtr-u.5   11446895   sister chromatid cohesion 1 protein 2 
 ghi-r.1   107914082   sister chromatid cohesion 1 protein 2-like 
 ghi-r.1   107944846   sister chromatid cohesion 1 protein 2 
 bna-r.1   111205384   sister chromatid cohesion 1 protein 2 
 bna-r.1   106402700   sister chromatid cohesion 1 protein 2 
 bna-r.1   111213224   sister chromatid cohesion 1 protein 2 
 cit-r.1   102620607   sister chromatid cohesion 1 protein 2 
 sly-u.5   101264090   sister chromatid cohesion 1 protein 2 
 sot-r.1   102599094   sister chromatid cohesion 1 protein 2 
 nta-r.1   107798511   sister chromatid cohesion 1 protein 2 
 nta-r.1   107770136   sister chromatid cohesion 1 protein 2 
 osa-u.5   4336225   sister chromatid cohesion 1 protein 2 
 zma-u.5   103641790   sister chromatid cohesion 1 protein 2 
 tae-r.2   123189591   sister chromatid cohesion 1 protein 2 
 tae-r.2   123053718   sister chromatid cohesion 1 protein 2 
 tae-r.2   123045830   sister chromatid cohesion 1 protein 2 
 hvu-r.1   123427071   sister chromatid cohesion 1 protein 2-like 
 sbi-r.1   8060176   uncharacterized LOC8060176 
 bdi-r.1   100843631   sister chromatid cohesion 1 protein 4 
 cre-r.1   CHLRE_09g414350v5   uncharacterized protein 

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Top 50 coexpressed genes to 100257596 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100257596 (vvi-u.5 coexpression data)

CoexMap"100257596"


vviLOC100257596 | Entrez gene ID : 100257596    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 2 3 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007130 [list] [network] synaptonemal complex assembly  (4 genes)  IEA  
GO:1990414 [list] [network] replication-born double-strand break repair via sister chromatid exchange  (5 genes)  IEA  
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (20 genes)  IEA  
GO CC
GO:0000795 [list] [network] synaptonemal complex  (4 genes)  IEA  
GO:0008278 [list] [network] cohesin complex  (6 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (124 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010660789.1 [sequence] [blastp]
XP_010660790.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  mito 1,  cysk_nucl 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_010660789.1)
nucl 6,  chlo 1,  cysk 1  (predict for XP_010660790.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_010660789.1)
mito 8  (predict for XP_010660790.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257596
vvi-r.5
for
100257596
ath-u.5
for
SYN2
gma-u.5
for
100810733
bra-r.6
for
103864028
ppo-u.5
for
18107254
mtr-u.5
for
11446895
ghi-r.1
for
107914082
ghi-r.1
for
107944846
bna-r.1
for
111205384
bna-r.1
for
106402700
bna-r.1
for
111213224
cit-r.1
for
102620607
sly-u.5
for
101264090
sot-r.1
for
102599094
nta-r.1
for
107798511
nta-r.1
for
107770136
osa-u.5
for
4336225
zma-u.5
for
103641790
tae-r.2
for
123189591
tae-r.2
for
123053718
tae-r.2
for
123045830
hvu-r.1
for
123427071
sbi-r.1
for
8060176
bdi-r.1
for
100843631
cre-r.1
for
CHLRE_09g414350v5


Ortholog ID: 9710
Species vvi ath gma bra ppo mtr ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100257596 SYN2 LOC100810733 LOC103864028 LOC18107254 LOC11446895 LOC107914082 LOC107944846 LOC111205384 LOC106402700 LOC111213224 LOC102620607 LOC101264090 LOC102599094 LOC107798511 LOC107770136 LOC4336225 LOC103641790 LOC123189591 LOC123053718 LOC123045830 LOC123427071 LOC8060176 LOC100843631 CHLRE_09g414350v5
Function* sister chromatid cohesion 1 protein 2 Rad21/Rec8-like family protein sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2-like sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2 sister chromatid cohesion 1 protein 2-like uncharacterized LOC8060176 sister chromatid cohesion 1 protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 4
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 4
bra03410 Base excision repair 3
bra03030 DNA replication 2
bra03420 Nucleotide excision repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03450 Non-homologous end-joining 4
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03450 Non-homologous end-joining 4
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
bna01232 Nucleotide metabolism 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
bna01232 Nucleotide metabolism 4
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
sly03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 5
tae03020 RNA polymerase 4
tae03030 DNA replication 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03430 Mismatch repair 4
bdi03460 Fanconi anemia pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257596 834084 100810733 103864028 18107254 11446895 107914082 107944846 111205384 106402700 111213224 102620607 101264090 102599094 107798511 107770136 4336225 103641790 123189591 123053718 123045830 123427071 8060176 100843631 5722347
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