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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100262140   U-box domain-containing protein 62 
 vvi-r.5   100262140   U-box domain-containing protein 62 
 ath-u.5   AT5G05230   RING/U-box superfamily protein 
 gma-u.5   100791099   U-box domain-containing protein 62 
 gma-u.5   100786717   U-box domain-containing protein 62 
 bra-r.6   103846877   U-box domain-containing protein 62 
 ppo-u.5   7459240   U-box domain-containing protein 62 
 mtr-u.5   25489827   U-box domain-containing protein 62 
 ghi-r.1   107962226   U-box domain-containing protein 62 
 ghi-r.1   107931604   U-box domain-containing protein 62 
 ghi-r.1   107940486   U-box domain-containing protein 62 
 bna-r.1   106419006   U-box domain-containing protein 62 
 bna-r.1   106440666   U-box domain-containing protein 62 
 cit-r.1   102611706   U-box domain-containing protein 62 
 sly-u.5   101265926   U-box domain-containing protein 62 
 sot-r.1   102583941   U-box domain-containing protein 62 
 nta-r.1   107831406   U-box domain-containing protein 62 
 nta-r.1   107810525   U-box domain-containing protein 62 
 zma-u.5   100276216   uncharacterized LOC100276216 
 hvu-r.1   123452959   U-box domain-containing protein 62-like 
 sbi-r.1   8057388   U-box domain-containing protein 62 

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Top 50 coexpressed genes to 100262140 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100262140 (vvi-u.5 coexpression data)

CoexMap"100262140"


vviLOC100262140 | Entrez gene ID : 100262140      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta zma hvu sbi cre tae bdi osa
Paralog 2 1 2 1 1 1 3 2 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (272 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (280 genes)  IEA  
Protein XP_002275253.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002275253.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002275253.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100262140
vvi-r.5
for
100262140
ath-u.5
for
AT5G05230
gma-u.5
for
100791099
gma-u.5
for
100786717
bra-r.6
for
103846877
ppo-u.5
for
7459240
mtr-u.5
for
25489827
ghi-r.1
for
107962226
ghi-r.1
for
107931604
ghi-r.1
for
107940486
bna-r.1
for
106419006
bna-r.1
for
106440666
cit-r.1
for
102611706
sly-u.5
for
101265926
sot-r.1
for
102583941
nta-r.1
for
107831406
nta-r.1
for
107810525
zma-u.5
for
100276216
hvu-r.1
for
123452959
sbi-r.1
for
8057388


Ortholog ID: 11996
Species vvi ath gma gma bra ppo mtr ghi ghi ghi bna bna cit sly sot nta nta zma hvu sbi
Symbol LOC100262140 AT5G05230 LOC100791099 LOC100786717 LOC103846877 LOC7459240 LOC25489827 LOC107962226 LOC107940486 LOC107959336 LOC106419006 LOC106440666 LOC102611706 LOC101265926 LOC102583941 LOC107831406 LOC107810525 LOC100276216 LOC123452959 LOC8057388
Function* U-box domain-containing protein 62 RING/U-box superfamily protein U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 U-box domain-containing protein 62 uncharacterized LOC100276216 U-box domain-containing protein 62-like U-box domain-containing protein 62
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna04145 Phagosome 2
bna04148 Efferocytosis 2
bna04517 IgSF CAM signaling 2
bna04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 2
bna04148 Efferocytosis 2
bna04517 IgSF CAM signaling 2
bna04518 Integrin signaling 2
bna04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100262140 830405 100791099 100786717 103846877 7459240 25489827 107962226 107940486 107959336 106419006 106440666 102611706 101265926 102583941 107831406 107810525 100276216 123452959 8057388
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