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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   cox2   cox2 
 vvi-r.5   cox2   cox2 
 ath-u.5   cox2   cytochrome c oxidase subunit 2 
 gma-u.5   COX2   cytochrome c oxidase subunit 2, mitochondrial 
 bra-r.6   117133605   cytochrome c oxidase subunit 2-like 
 ghi-r.1   cox2   cytochrome c oxidase subunit 2 
 bna-r.1   cox2-1   cytochrome c oxidase subunit 2 
 bna-r.1   cox2-2   cytochrome c oxidase subunit 2 
 cit-r.1   cox2   cytochrome c oxidase subunit 2 
 sot-r.1   107063149   cytochrome c oxidase subunit 2-like 
 nta-r.1   cox2   cytochrome oxidase subunit 2 
 nta-r.1   142170197   cytochrome c oxidase subunit 2-like 
 osa-u.5   cox2   cytochrome c oxidase subunit 2 
 zma-u.5   118473337   cytochrome c oxidase subunit 2-like 
 zma-u.5   118473339   cytochrome c oxidase subunit 2-like 
 zma-u.5   118473343   cytochrome c oxidase subunit 2-like 
 sbi-r.1   cox2   cytochrome c oxidase subunit 2 
 cre-r.1   CHLRE_03g154350v5   uncharacterized protein 
 cre-r.1   CHLRE_01g049500v5   uncharacterized protein 

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Top 50 coexpressed genes to cox2 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to cox2 (vvi-u.5 coexpression data)

CoexMap"7498556"


vvicox2 | Entrez gene ID : 7498556      
Species vvi ath gma bra ghi bna cit sot nta osa zma sbi cre sly mtr tae hvu ppo bdi
Paralog 2 1 1 1 1 2 1 1 2 1 3 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00190 [list] [network] Oxidative phosphorylation (155 genes)
GO BP
GO CC
GO MF
Protein YP_002608406.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  E.R. 2,  plas 1,  extr 1,  golg 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for YP_002608406.1)
Subcellular
localization
TargetP
other 8,  scret 7  (predict for YP_002608406.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
cox2
vvi-r.5
for
cox2
ath-u.5
for
cox2
gma-u.5
for
COX2
bra-r.6
for
117133605
ghi-r.1
for
cox2
bna-r.1
for
cox2-1
bna-r.1
for
cox2-2
cit-r.1
for
cox2
sot-r.1
for
107063149
nta-r.1
for
cox2
nta-r.1
for
142170197
osa-u.5
for
cox2
zma-u.5
for
118473337
zma-u.5
for
118473339
zma-u.5
for
118473343
sbi-r.1
for
cox2
cre-r.1
for
CHLRE_03g154350v5
cre-r.1
for
CHLRE_01g049500v5


Ortholog ID: 3180
Species vvi ath gma bra ghi bna bna cit sot nta nta osa zma zma zma tae sbi cre cre
Symbol cox2 cox2 COX2 LOC117133605 cox2 cox2-1 cox2-2 cox2 LOC107063149 cox2 LOC142170197 cox2 LOC118471936 LOC118475811 LOC118475787 cox2 cox2 CHLRE_03g154350v5 CHLRE_01g049500v5
Function* cox2 cytochrome c oxidase subunit 2 cytochrome c oxidase subunit 2, mitochondrial cytochrome c oxidase subunit 2-like cytochrome c oxidase subunit 2 cytochrome c oxidase subunit 2 cytochrome c oxidase subunit 2 cytochrome c oxidase subunit 2 cytochrome c oxidase subunit 2-like cytochrome oxidase subunit 2 cytochrome c oxidase subunit 2-like cytochrome c oxidase subunit 2 uncharacterized LOC118471936 cytochrome c oxidase subunit 1+2-like uncharacterized LOC118475787 cox2 cytochrome c oxidase subunit 2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
gma03050 Proteasome 4
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 13
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 8
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 8
nta03020 RNA polymerase 3
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 9
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 9
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7498556 36335641 100782702 117133605 24679512 4237883 4237884 36487036 107063149 3205306 142170197 6450161 118471936 118475811 118475787 34688777 4306043 5723086 5715722
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