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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   542719   acidic ribosomal protein P1a 
 zma-u.5   542719   acidic ribosomal protein P1a 
 zma-r.6   542719   acidic ribosomal protein P1a 
 zma-u.5   100282819   60S acidic ribosomal protein P1 
 sbi-r.1   8068570   60S acidic ribosomal protein P1 
 osa-u.5   4344516   large ribosomal subunit protein P1 
 tae-r.2   606341   60S acidic ribosomal protein P1 
 tae-r.2   123156517   60S acidic ribosomal protein P1 
 tae-r.2   123164840   60S acidic ribosomal protein P1 
 hvu-r.1   123407887   60S acidic ribosomal protein P1-like 
 bdi-r.1   100839013   60S acidic ribosomal protein P1 
 ath-u.5   AT4G00810   60S acidic ribosomal protein family 
 ath-u.5   AT5G47700   60S acidic ribosomal protein family 
 gma-u.5   100305677   uncharacterized LOC100305677 
 gma-u.5   100801741   60S acidic ribosomal protein P1 
 gma-u.5   100785976   60S acidic ribosomal protein P1 
 sly-u.5   101249479   large ribosomal subunit protein P1 
 sly-u.5   104648409   large ribosomal subunit protein P1-like 
 sly-u.5   101247992   large ribosomal subunit protein P1-like 
 bra-r.6   103836662   60S acidic ribosomal protein P1-1 
 bra-r.6   103844623   60S acidic ribosomal protein P1-3 
 bra-r.6   103858814   60S acidic ribosomal protein P1-2 
 vvi-u.5   109124269   large ribosomal subunit protein P1 
 vvi-u.5   100249556   large ribosomal subunit protein P1 
 vvi-u.5   100261912   large ribosomal subunit protein P1 
 ppo-u.5   18105252   60S acidic ribosomal protein P1 
 ppo-u.5   7478800   60S acidic ribosomal protein P1 
 ppo-u.5   7464480   60S acidic ribosomal protein P1 
 mtr-u.5   11433356   60S acidic ribosomal protein P1-3 
 mtr-u.5   25486934   60S acidic ribosomal protein P1 
 ghi-r.1   107953005   60S acidic ribosomal protein P1 
 ghi-r.1   107890794   60S acidic ribosomal protein P1 
 ghi-r.1   107912285   60S acidic ribosomal protein P1 
 bna-r.1   125584308   60S acidic ribosomal protein P1-1 
 bna-r.1   125595221   60S acidic ribosomal protein P1-1-like 
 bna-r.1   111212473   60S acidic ribosomal protein P1-2 
 sot-r.1   102585385   60S acidic ribosomal protein P1-like 
 cit-r.1   102620783   60S acidic ribosomal protein P1-like 
 cit-r.1   102611846   60S acidic ribosomal protein P1 
 nta-r.1   107825752   large ribosomal subunit protein P1-like 
 nta-r.1   107761577   large ribosomal subunit protein P1-like 
 cre-r.1   CHLRE_17g738300v5   uncharacterized protein 

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Top 50 coexpressed genes to 542719 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542719 (zma-m.5 coexpression data)

CoexMap"542719"


zmaLOC542719 | Entrez gene ID : 542719      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 1 1 2 3 3 3 3 3 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO:0006414 [list] [network] translational elongation  (54 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (68 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (112 genes)  IEA  
GO:0005840 [list] [network] ribosome  (477 genes)  IEA  
GO MF
GO:0030295 [list] [network] protein kinase activator activity  (22 genes)  IEA  
GO:0043021 [list] [network] ribonucleoprotein complex binding  (71 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
Protein NP_001105701.1 [sequence] [blastp]
XP_008648318.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001105701.1)
cyto 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_008648318.1)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for NP_001105701.1)
other 5,  scret 4  (predict for XP_008648318.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
542719
zma-u.5
for
542719
zma-r.6
for
542719
zma-u.5
for
100282819
sbi-r.1
for
8068570
osa-u.5
for
4344516
tae-r.2
for
606341
tae-r.2
for
123156517
tae-r.2
for
123164840
hvu-r.1
for
123407887
bdi-r.1
for
100839013
ath-u.5
for
AT4G00810
ath-u.5
for
AT5G47700
gma-u.5
for
100305677
gma-u.5
for
100801741
gma-u.5
for
100785976
sly-u.5
for
101249479
sly-u.5
for
104648409
sly-u.5
for
101247992
bra-r.6
for
103836662
bra-r.6
for
103844623
bra-r.6
for
103858814
vvi-u.5
for
109124269
vvi-u.5
for
100249556
vvi-u.5
for
100261912
ppo-u.5
for
18105252
ppo-u.5
for
7478800
ppo-u.5
for
7464480
mtr-u.5
for
11433356
mtr-u.5
for
25486934
ghi-r.1
for
107953005
ghi-r.1
for
107890794
ghi-r.1
for
107912285
bna-r.1
for
125584308
bna-r.1
for
125595221
bna-r.1
for
111212473
sot-r.1
for
102585385
cit-r.1
for
102620783
cit-r.1
for
102611846
nta-r.1
for
107825752
nta-r.1
for
107761577
cre-r.1
for
CHLRE_17g738300v5


Ortholog ID: 1212
Species zma zma sbi osa tae tae tae hvu bdi ath ath gma gma gma sly sly sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta cre
Symbol LOC542719 LOC100282819 LOC8068570 LOC4344516 LOC606341 LOC123156517 LOC123164840 LOC123407887 LOC100839013 AT4G00810 AT5G47700 LOC100305677 LOC100785976 LOC100791962 LOC101249479 LOC101257793 LOC101259584 LOC103844623 LOC103858814 LOC109124269 LOC100261912 LOC100257825 LOC7478800 LOC7464480 LOC7464304 LOC11433356 LOC25486934 LOC11441480 LOC107912285 LOC107930166 LOC107930453 LOC125595221 LOC106370899 LOC106370896 LOC102585385 LOC102577551 LOC102620783 LOC102611846 LOC107825752 LOC107802904 CHLRE_17g738300v5
Function* acidic ribosomal protein P1a 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 large ribosomal subunit protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1 60S acidic ribosomal protein family 60S acidic ribosomal protein family uncharacterized LOC100305677 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-3 large ribosomal subunit protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 60S acidic ribosomal protein P1-3 60S acidic ribosomal protein P1-2 large ribosomal subunit protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-3 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-1-like 60S acidic ribosomal protein P1-3-like 60S acidic ribosomal protein P1-3-like 60S acidic ribosomal protein P1-like acidic ribosomal protein P1a-like 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1 large ribosomal subunit protein P1-like uncharacterized LOC107802904 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542719 100282819 8068570 4344516 606341 123156517 123164840 123407887 100839013 828004 834821 100305677 100785976 100791962 101249479 101257793 101259584 103844623 103858814 109124269 100261912 100257825 7478800 7464480 7464304 11433356 25486934 11441480 107912285 107930166 107930453 125595221 106370899 106370896 102585385 102577551 102620783 102611846 107825752 107802904 5725138
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