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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464480   60S acidic ribosomal protein P1 
 ppo-r.4   7464480   60S acidic ribosomal protein P1 
 ppo-m.4   7464480   60S acidic ribosomal protein P1 
 ppo-u.5   7464304   60S acidic ribosomal protein P1 
 ppo-u.5   7478800   60S acidic ribosomal protein P1 
 ppo-u.5   18105252   60S acidic ribosomal protein P1 
 gma-u.5   100305677   uncharacterized LOC100305677 
 gma-u.5   100791962   60S acidic ribosomal protein P1-3 
 gma-u.5   100801741   60S acidic ribosomal protein P1 
 mtr-u.5   11433356   60S acidic ribosomal protein P1-3 
 mtr-u.5   11441480   60S acidic ribosomal protein P1 
 ath-u.5   AT4G00810   60S acidic ribosomal protein family 
 ath-u.5   AT5G47700   60S acidic ribosomal protein family 
 vvi-u.5   100261912   large ribosomal subunit protein P1 
 vvi-u.5   100257825   large ribosomal subunit protein P1 
 vvi-u.5   100249556   large ribosomal subunit protein P1 
 sly-u.5   101249479   large ribosomal subunit protein P1 
 sly-u.5   104648409   large ribosomal subunit protein P1-like 
 sly-u.5   101259584   large ribosomal subunit protein P1 
 osa-u.5   4344516   large ribosomal subunit protein P1 
 zma-u.5   542719   acidic ribosomal protein P1a 
 zma-u.5   100282819   60S acidic ribosomal protein P1 

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Top 50 coexpressed genes to 7464480 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464480 (ppo-u.5 coexpression data)

CoexMap"7464480"


ppoLOC7464480 | Entrez gene ID : 7464480    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 2 2 3 3 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006414 [list] [network] translational elongation  (40 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (97 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (171 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0030295 [list] [network] protein kinase activator activity  (41 genes)  IEA  
GO:0043021 [list] [network] ribonucleoprotein complex binding  (82 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002321361.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 3,  extr 3,  chlo_mito 3  (predict for XP_002321361.4)
Subcellular
localization
TargetP
other 6  (predict for XP_002321361.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464480

.
ppo-r.4
for
7464480

.
ppo-m.4
for
7464480

.
ppo-u.5
for
7464304

.
ppo-u.5
for
7478800

.
ppo-u.5
for
18105252

.
gma-u.5
for
100305677

.
gma-u.5
for
100791962

.
gma-u.5
for
100801741

.
mtr-u.5
for
11433356

.
mtr-u.5
for
11441480

.
ath-u.5
for
AT4G00810

.
ath-u.5
for
AT5G47700

.
vvi-u.5
for
100261912

.
vvi-u.5
for
100257825

.
vvi-u.5
for
100249556

.
sly-u.5
for
101249479

.
sly-u.5
for
104648409

.
sly-u.5
for
101259584

.
osa-u.5
for
4344516

.
zma-u.5
for
542719

.
zma-u.5
for
100282819

.


Ortholog ID: 1212
Species ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta
Symbol AT5G47700 LOC100305677 LOC100785976 LOC101259584 LOC101257793 LOC4344516 LOC100282819 LOC542719 LOC103844623 LOC103858814 LOC100261912 LOC100257825 LOC7478800 LOC7464480 LOC11441480 LOC25486934 LOC123156517 LOC606341 LOC123407887 LOC107930166 LOC107930453 LOC106370896 LOC106370899 CHLRE_17g738300v5 LOC8068570 LOC102585385 LOC102620783 LOC102611846 LOC100839013 LOC107802904
Function* 60S acidic ribosomal protein family uncharacterized LOC100305677 60S acidic ribosomal protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 60S acidic ribosomal protein P1 acidic ribosomal protein P1a 60S acidic ribosomal protein P1-3 60S acidic ribosomal protein P1-2 large ribosomal subunit protein P1 large ribosomal subunit protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-3-like 60S acidic ribosomal protein P1-3-like uncharacterized protein 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 uncharacterized LOC107802904
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
cre04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834821 100305677 100785976 101259584 101257793 4344516 100282819 542719 103844623 103858814 100261912 100257825 7478800 7464480 11441480 25486934 123156517 606341 123407887 107930166 107930453 106370896 106370899 5725138 8068570 102585385 102620783 102611846 100839013 107802904
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