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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   100272983   Indole-3-glycerol phosphate synthase chloroplastic 
 zma-u.5   100272983   Indole-3-glycerol phosphate synthase chloroplastic 
 zma-u.5   100286258   indole-3-glycerol phosphate synthase 
 sbi-r.1   8084507   indole-3-glycerol phosphate synthase, chloroplastic 
 sbi-r.1   8073231   indole-3-glycerol phosphate synthase, chloroplastic 
 sbi-r.1   8071864   indole-3-glycerol phosphate synthase 
 osa-u.5   4345257   indole-3-glycerol phosphate synthase, chloroplastic 
 osa-u.5   4346529   uncharacterized LOC4346529 
 tae-r.2   123159904   indole-3-glycerol phosphate synthase, chloroplastic 
 tae-r.2   123149505   indole-3-glycerol phosphate synthase, chloroplastic 
 tae-r.2   123120877   indole-3-glycerol phosphate synthase, chloroplastic 
 hvu-r.1   123398507   indole-3-glycerol phosphate synthase, chloroplastic-like 
 hvu-r.1   123407514   indole-3-glycerol phosphate synthase, chloroplastic-like 
 bdi-r.1   100839441   indole-3-glycerol phosphate synthase 
 bdi-r.1   100842503   indole-3-glycerol phosphate synthase, chloroplastic 

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Top 50 coexpressed genes to 100272983 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272983 (zma-r.6 coexpression data)

CoexMap"100272983"


zmaLOC100272983 | Entrez gene ID : 100272983      
Species zma sbi osa tae hvu bdi cre vvi bra ath ppo mtr nta bna gma cit sly ghi sot
Paralog 3 3 2 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (59 genes)
zma01230 [list] [network] Biosynthesis of amino acids (293 genes)
GO BP
GO:0000162 [list] [network] L-tryptophan biosynthetic process  (28 genes)  IEA  
GO:0006568 [list] [network] L-tryptophan metabolic process  (33 genes)  IEA  
GO CC
GO MF
GO:0004425 [list] [network] indole-3-glycerol-phosphate synthase activity  (3 genes)  IEA  
GO:0004640 [list] [network] phosphoribosylanthranilate isomerase activity  (5 genes)  IEA  
Protein NP_001140906.1 [sequence] [blastp]
XP_008661581.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for NP_001140906.1)
chlo 8,  mito 1  (predict for XP_008661581.2)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for NP_001140906.1)
chlo 7,  mito 5  (predict for XP_008661581.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
100272983
zma-u.5
for
100272983
zma-u.5
for
100286258
sbi-r.1
for
8084507
sbi-r.1
for
8073231
sbi-r.1
for
8071864
osa-u.5
for
4345257
osa-u.5
for
4346529
tae-r.2
for
123159904
tae-r.2
for
123149505
tae-r.2
for
123120877
hvu-r.1
for
123398507
hvu-r.1
for
123407514
bdi-r.1
for
100839441
bdi-r.1
for
100842503


Ortholog ID: 13302
Species zma zma sbi sbi sbi osa osa tae tae tae hvu hvu bdi bdi
Symbol LOC100272983 LOC100286258 LOC8084507 LOC8073231 LOC8071864 LOC4345257 LOC4346529 LOC123159904 LOC123111561 LOC123106921 LOC123398507 LOC123407514 LOC100839441 LOC100842503
Function* Indole-3-glycerol phosphate synthase chloroplastic indole-3-glycerol phosphate synthase indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase indole-3-glycerol phosphate synthase, chloroplastic uncharacterized LOC4346529 indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic-like indole-3-glycerol phosphate synthase, chloroplastic-like indole-3-glycerol phosphate synthase indole-3-glycerol phosphate synthase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 11
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
zma00270 Cysteine and methionine metabolism 4
zma00450 Selenocompound metabolism 3
zma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00402 Benzoxazinoid biosynthesis 9
zma00999 Biosynthesis of various plant secondary metabolites 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi01230 Biosynthesis of amino acids 9
sbi00941 Flavonoid biosynthesis 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sbi01230 Biosynthesis of amino acids 8
sbi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sbi01230 Biosynthesis of amino acids 8
sbi00350 Tyrosine metabolism 3
sbi00360 Phenylalanine metabolism 3
sbi00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 10
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
osa00260 Glycine, serine and threonine metabolism 3
osa00380 Tryptophan metabolism 3
osa00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa01230 Biosynthesis of amino acids 6
osa00260 Glycine, serine and threonine metabolism 2
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
tae01230 Biosynthesis of amino acids 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
tae01230 Biosynthesis of amino acids 10
tae00402 Benzoxazinoid biosynthesis 4
tae00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae00402 Benzoxazinoid biosynthesis 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 7
hvu00220 Arginine biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00480 Glutathione metabolism 3
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00260 Glycine, serine and threonine metabolism 3
bdi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100272983 100286258 8084507 8073231 8071864 4345257 4346529 123159904 123111561 123106921 123398507 123407514 100839441 100842503
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